Gene : AL2G11760 A. lyrata v2.1

Defline:  (1 of 1) PTHR11592:SF27 - GLUTATHIONE PEROXIDASE 8-RELATED Genomic Order:  160
Name:  ? AL2G11760 Secondary Identifier:  ? PAC:35944901

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata DETOX1-PWY-1 Arabidopsis lyrata pathologic  
Alyrata PWY-4081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G11760 0.5kb upstream 0.5kb upstream 1973   true scaffold_2: 854478-856450 Arabidopsis lyrata
AL2G11760 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 855951-856450 Arabidopsis lyrata
AL2G11760 0.5kb downstream 0.5kb downstream 1973   true scaffold_2: 853978-855950 Arabidopsis lyrata
AL2G11760 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 853978-854477 Arabidopsis lyrata
AL2G11760 1.0kb upstream 1.0kb upstream 2473   true scaffold_2: 854478-856950 Arabidopsis lyrata
AL2G11760 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 855951-856950 Arabidopsis lyrata
AL2G11760 1.0kb downstream 1.0kb downstream 2473   true scaffold_2: 853478-855950 Arabidopsis lyrata
AL2G11760 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 853478-854477 Arabidopsis lyrata
AL2G11760 2.0kb upstream 2.0kb upstream 3473   true scaffold_2: 854478-857950 Arabidopsis lyrata
AL2G11760 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 855951-857950 Arabidopsis lyrata
AL2G11760 2.0kb downstream 2.0kb downstream 3473   true scaffold_2: 852478-855950 Arabidopsis lyrata
AL2G11760 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 852478-854477 Arabidopsis lyrata
AL2G11760 5.0kb upstream 5.0kb upstream 6473   true scaffold_2: 854478-860950 Arabidopsis lyrata
AL2G11760 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 855951-860950 Arabidopsis lyrata
AL2G11760 5.0kb downstream 5.0kb downstream 6473   true scaffold_2: 849478-855950 Arabidopsis lyrata
AL2G11760 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 849478-854477 Arabidopsis lyrata
AL2G11760 10.0kb upstream 10.0kb upstream 11473   true scaffold_2: 854478-865950 Arabidopsis lyrata
AL2G11760 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 855951-865950 Arabidopsis lyrata
AL2G11760 10.0kb downstream 10.0kb downstream 11473   true scaffold_2: 844478-855950 Arabidopsis lyrata
AL2G11760 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 844478-854477 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366348 5261 Brassicaceae View MSA
123828080 5264 Brassicales-Malvales View MSA
124340471 5266 SBM View MSA
124242823 5268 Malvidae View MSA
124066443 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain