Gene : AL2G10050 A. lyrata v2.1

Defline:  (1 of 4) K00001 - alcohol dehydrogenase (E1.1.1.1, adh) Genomic Order:  5
Name:  ? AL2G10050 Secondary Identifier:  ? PAC:35946930

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5486 Arabidopsis lyrata pathologic  
Alyrata PWY-5751 Arabidopsis lyrata pathologic  
Alyrata PWY-6333 Arabidopsis lyrata pathologic  
Alyrata PWY66-21 Arabidopsis lyrata pathologic  
Alyrata PWY66-389 Arabidopsis lyrata pathologic  
Alyrata PWY-6802 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G10050 0.5kb upstream 0.5kb upstream 2260   true scaffold_2: 22602-24861 Arabidopsis lyrata
AL2G10050 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 24362-24861 Arabidopsis lyrata
AL2G10050 0.5kb downstream 0.5kb downstream 2260   true scaffold_2: 22102-24361 Arabidopsis lyrata
AL2G10050 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 22102-22601 Arabidopsis lyrata
AL2G10050 1.0kb upstream 1.0kb upstream 2760   true scaffold_2: 22602-25361 Arabidopsis lyrata
AL2G10050 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 24362-25361 Arabidopsis lyrata
AL2G10050 1.0kb downstream 1.0kb downstream 2760   true scaffold_2: 21602-24361 Arabidopsis lyrata
AL2G10050 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 21602-22601 Arabidopsis lyrata
AL2G10050 2.0kb upstream 2.0kb upstream 3760   true scaffold_2: 22602-26361 Arabidopsis lyrata
AL2G10050 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 24362-26361 Arabidopsis lyrata
AL2G10050 2.0kb downstream 2.0kb downstream 3760   true scaffold_2: 20602-24361 Arabidopsis lyrata
AL2G10050 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 20602-22601 Arabidopsis lyrata
AL2G10050 5.0kb upstream 5.0kb upstream 6760   true scaffold_2: 22602-29361 Arabidopsis lyrata
AL2G10050 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 24362-29361 Arabidopsis lyrata
AL2G10050 5.0kb downstream 5.0kb downstream 6760   true scaffold_2: 17602-24361 Arabidopsis lyrata
AL2G10050 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 17602-22601 Arabidopsis lyrata
AL2G10050 10.0kb upstream 10.0kb upstream 11760   true scaffold_2: 22602-34361 Arabidopsis lyrata
AL2G10050 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 24362-34361 Arabidopsis lyrata
AL2G10050 10.0kb downstream 10.0kb downstream 11760   true scaffold_2: 12602-24361 Arabidopsis lyrata
AL2G10050 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 12602-22601 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369812 5261 Brassicaceae View MSA
123838833 5264 Brassicales-Malvales View MSA
124322503 5266 SBM View MSA
124238784 5268 Malvidae View MSA
124061215 5270 Rosid View MSA
123741103 5271 Pentapetalae View MSA
122790051 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain