Gene : AL2G13190 A. lyrata v2.1

Defline:  (1 of 2) PTHR31953:SF17 - ACID BETA-FRUCTOFURANOSIDASE 3, VACUOLAR-RELATED Genomic Order:  288
Name:  ? AL2G13190 Secondary Identifier:  ? PAC:35945515

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-621 Arabidopsis lyrata pathologic  
Alyrata PWY66-373 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G13190 0.5kb upstream 0.5kb upstream 4642   true scaffold_2: 1579419-1584060 Arabidopsis lyrata
AL2G13190 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 1583561-1584060 Arabidopsis lyrata
AL2G13190 0.5kb downstream 0.5kb downstream 4642   true scaffold_2: 1578919-1583560 Arabidopsis lyrata
AL2G13190 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 1578919-1579418 Arabidopsis lyrata
AL2G13190 1.0kb upstream 1.0kb upstream 5142   true scaffold_2: 1579419-1584560 Arabidopsis lyrata
AL2G13190 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 1583561-1584560 Arabidopsis lyrata
AL2G13190 1.0kb downstream 1.0kb downstream 5142   true scaffold_2: 1578419-1583560 Arabidopsis lyrata
AL2G13190 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 1578419-1579418 Arabidopsis lyrata
AL2G13190 2.0kb upstream 2.0kb upstream 6142   true scaffold_2: 1579419-1585560 Arabidopsis lyrata
AL2G13190 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 1583561-1585560 Arabidopsis lyrata
AL2G13190 2.0kb downstream 2.0kb downstream 6142   true scaffold_2: 1577419-1583560 Arabidopsis lyrata
AL2G13190 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 1577419-1579418 Arabidopsis lyrata
AL2G13190 5.0kb upstream 5.0kb upstream 9142   true scaffold_2: 1579419-1588560 Arabidopsis lyrata
AL2G13190 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 1583561-1588560 Arabidopsis lyrata
AL2G13190 5.0kb downstream 5.0kb downstream 9142   true scaffold_2: 1574419-1583560 Arabidopsis lyrata
AL2G13190 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 1574419-1579418 Arabidopsis lyrata
AL2G13190 10.0kb upstream 10.0kb upstream 14142   true scaffold_2: 1579419-1593560 Arabidopsis lyrata
AL2G13190 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 1583561-1593560 Arabidopsis lyrata
AL2G13190 10.0kb downstream 10.0kb downstream 14142   true scaffold_2: 1569419-1583560 Arabidopsis lyrata
AL2G13190 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 1569419-1579418 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375295 5261 Brassicaceae View MSA
123800923 5264 Brassicales-Malvales View MSA
124346860 5266 SBM View MSA
124237884 5268 Malvidae View MSA
124068075 5270 Rosid View MSA
123746739 5271 Pentapetalae View MSA
122793331 5272 Eudicot View MSA
122044228 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain