Gene : AL2G16480 A. lyrata v2.1

Defline:  (1 of 5) K12844 - U4/U6 small nuclear ribonucleoprotein PRP31 (PRPF31) Genomic Order:  586
Name:  ? AL2G16480 Secondary Identifier:  ? PAC:35944798

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G16480 0.5kb upstream 0.5kb upstream 3104   true scaffold_2: 3311271-3314374 Arabidopsis lyrata
AL2G16480 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 3313875-3314374 Arabidopsis lyrata
AL2G16480 0.5kb downstream 0.5kb downstream 3104   true scaffold_2: 3310771-3313874 Arabidopsis lyrata
AL2G16480 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 3310771-3311270 Arabidopsis lyrata
AL2G16480 1.0kb upstream 1.0kb upstream 3604   true scaffold_2: 3311271-3314874 Arabidopsis lyrata
AL2G16480 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 3313875-3314874 Arabidopsis lyrata
AL2G16480 1.0kb downstream 1.0kb downstream 3604   true scaffold_2: 3310271-3313874 Arabidopsis lyrata
AL2G16480 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 3310271-3311270 Arabidopsis lyrata
AL2G16480 2.0kb upstream 2.0kb upstream 4604   true scaffold_2: 3311271-3315874 Arabidopsis lyrata
AL2G16480 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 3313875-3315874 Arabidopsis lyrata
AL2G16480 2.0kb downstream 2.0kb downstream 4604   true scaffold_2: 3309271-3313874 Arabidopsis lyrata
AL2G16480 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 3309271-3311270 Arabidopsis lyrata
AL2G16480 5.0kb upstream 5.0kb upstream 7604   true scaffold_2: 3311271-3318874 Arabidopsis lyrata
AL2G16480 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 3313875-3318874 Arabidopsis lyrata
AL2G16480 5.0kb downstream 5.0kb downstream 7604   true scaffold_2: 3306271-3313874 Arabidopsis lyrata
AL2G16480 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 3306271-3311270 Arabidopsis lyrata
AL2G16480 10.0kb upstream 10.0kb upstream 12604   true scaffold_2: 3311271-3323874 Arabidopsis lyrata
AL2G16480 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 3313875-3323874 Arabidopsis lyrata
AL2G16480 10.0kb downstream 10.0kb downstream 12604   true scaffold_2: 3301271-3313874 Arabidopsis lyrata
AL2G16480 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 3301271-3311270 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372123 5261 Brassicaceae View MSA
123828059 5264 Brassicales-Malvales View MSA
124344698 5266 SBM View MSA
124244824 5268 Malvidae View MSA
124062587 5270 Rosid View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain