Gene : AL2G16260 A. lyrata v2.1

Defline:  (1 of 2) K09680 - type II pantothenate kinase (coaW) Genomic Order:  566
Name:  ? AL2G16260 Secondary Identifier:  ? PAC:35945086

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PANTO-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G16260 0.5kb upstream 0.5kb upstream 8746   true scaffold_2: 3183482-3192227 Arabidopsis lyrata
AL2G16260 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 3183482-3183981 Arabidopsis lyrata
AL2G16260 0.5kb downstream 0.5kb downstream 8746   true scaffold_2: 3183982-3192727 Arabidopsis lyrata
AL2G16260 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 3192228-3192727 Arabidopsis lyrata
AL2G16260 1.0kb upstream 1.0kb upstream 9246   true scaffold_2: 3182982-3192227 Arabidopsis lyrata
AL2G16260 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 3182982-3183981 Arabidopsis lyrata
AL2G16260 1.0kb downstream 1.0kb downstream 9246   true scaffold_2: 3183982-3193227 Arabidopsis lyrata
AL2G16260 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 3192228-3193227 Arabidopsis lyrata
AL2G16260 2.0kb upstream 2.0kb upstream 10246   true scaffold_2: 3181982-3192227 Arabidopsis lyrata
AL2G16260 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 3181982-3183981 Arabidopsis lyrata
AL2G16260 2.0kb downstream 2.0kb downstream 10246   true scaffold_2: 3183982-3194227 Arabidopsis lyrata
AL2G16260 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 3192228-3194227 Arabidopsis lyrata
AL2G16260 5.0kb upstream 5.0kb upstream 13246   true scaffold_2: 3178982-3192227 Arabidopsis lyrata
AL2G16260 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 3178982-3183981 Arabidopsis lyrata
AL2G16260 5.0kb downstream 5.0kb downstream 13246   true scaffold_2: 3183982-3197227 Arabidopsis lyrata
AL2G16260 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 3192228-3197227 Arabidopsis lyrata
AL2G16260 10.0kb upstream 10.0kb upstream 18246   true scaffold_2: 3173982-3192227 Arabidopsis lyrata
AL2G16260 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 3173982-3183981 Arabidopsis lyrata
AL2G16260 10.0kb downstream 10.0kb downstream 18246   true scaffold_2: 3183982-3202227 Arabidopsis lyrata
AL2G16260 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 3192228-3202227 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366539 5261 Brassicaceae View MSA
123830738 5264 Brassicales-Malvales View MSA
124342070 5266 SBM View MSA
124250163 5268 Malvidae View MSA
124068622 5270 Rosid View MSA
123738077 5271 Pentapetalae View MSA
122769910 5272 Eudicot View MSA
122042911 5273 Angiosperm View MSA
121349290 5274 Embryophyte View MSA
123381257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain