Gene : AL2G16100 A. lyrata v2.1

Defline:  (1 of 1) 4.1.3.36 - 1,4-dihydroxy-2-naphthoyl-CoA synthase / o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) Genomic Order:  552
Name:  ? AL2G16100 Secondary Identifier:  ? PAC:35945300

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5837 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G16100 0.5kb upstream 0.5kb upstream 3272   true scaffold_2: 3103152-3106423 Arabidopsis lyrata
AL2G16100 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 3103152-3103651 Arabidopsis lyrata
AL2G16100 0.5kb downstream 0.5kb downstream 3272   true scaffold_2: 3103652-3106923 Arabidopsis lyrata
AL2G16100 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 3106424-3106923 Arabidopsis lyrata
AL2G16100 1.0kb upstream 1.0kb upstream 3772   true scaffold_2: 3102652-3106423 Arabidopsis lyrata
AL2G16100 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 3102652-3103651 Arabidopsis lyrata
AL2G16100 1.0kb downstream 1.0kb downstream 3772   true scaffold_2: 3103652-3107423 Arabidopsis lyrata
AL2G16100 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 3106424-3107423 Arabidopsis lyrata
AL2G16100 2.0kb upstream 2.0kb upstream 4772   true scaffold_2: 3101652-3106423 Arabidopsis lyrata
AL2G16100 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 3101652-3103651 Arabidopsis lyrata
AL2G16100 2.0kb downstream 2.0kb downstream 4772   true scaffold_2: 3103652-3108423 Arabidopsis lyrata
AL2G16100 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 3106424-3108423 Arabidopsis lyrata
AL2G16100 5.0kb upstream 5.0kb upstream 7772   true scaffold_2: 3098652-3106423 Arabidopsis lyrata
AL2G16100 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 3098652-3103651 Arabidopsis lyrata
AL2G16100 5.0kb downstream 5.0kb downstream 7772   true scaffold_2: 3103652-3111423 Arabidopsis lyrata
AL2G16100 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 3106424-3111423 Arabidopsis lyrata
AL2G16100 10.0kb upstream 10.0kb upstream 12772   true scaffold_2: 3093652-3106423 Arabidopsis lyrata
AL2G16100 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 3093652-3103651 Arabidopsis lyrata
AL2G16100 10.0kb downstream 10.0kb downstream 12772   true scaffold_2: 3103652-3116423 Arabidopsis lyrata
AL2G16100 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 3106424-3116423 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365259 5261 Brassicaceae View MSA
123830601 5264 Brassicales-Malvales View MSA
124337572 5266 SBM View MSA
124237230 5268 Malvidae View MSA
124066910 5270 Rosid View MSA
123738598 5271 Pentapetalae View MSA
122786230 5272 Eudicot View MSA
122043180 5273 Angiosperm View MSA
121346128 5274 Embryophyte View MSA
123423771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain