Gene : AL2G21530 A. lyrata v2.1

Defline:  (1 of 2) K01963 - acetyl-CoA carboxylase carboxyl transferase subunit beta (accD) Genomic Order:  986
Name:  ? AL2G21530 Secondary Identifier:  ? PAC:35946926

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1264 Arabidopsis lyrata pathologic  
Alyrata PWY-4381 Arabidopsis lyrata pathologic  
Alyrata PWY-5156 Arabidopsis lyrata pathologic  
Alyrata PWY-7388 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G21530 0.5kb upstream 0.5kb upstream 1995   true scaffold_2: 9157823-9159817 Arabidopsis lyrata
AL2G21530 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 9157823-9158322 Arabidopsis lyrata
AL2G21530 0.5kb downstream 0.5kb downstream 1995   true scaffold_2: 9158323-9160317 Arabidopsis lyrata
AL2G21530 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 9159818-9160317 Arabidopsis lyrata
AL2G21530 1.0kb upstream 1.0kb upstream 2495   true scaffold_2: 9157323-9159817 Arabidopsis lyrata
AL2G21530 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 9157323-9158322 Arabidopsis lyrata
AL2G21530 1.0kb downstream 1.0kb downstream 2495   true scaffold_2: 9158323-9160817 Arabidopsis lyrata
AL2G21530 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 9159818-9160817 Arabidopsis lyrata
AL2G21530 2.0kb upstream 2.0kb upstream 3495   true scaffold_2: 9156323-9159817 Arabidopsis lyrata
AL2G21530 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 9156323-9158322 Arabidopsis lyrata
AL2G21530 2.0kb downstream 2.0kb downstream 3495   true scaffold_2: 9158323-9161817 Arabidopsis lyrata
AL2G21530 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 9159818-9161817 Arabidopsis lyrata
AL2G21530 5.0kb upstream 5.0kb upstream 6495   true scaffold_2: 9153323-9159817 Arabidopsis lyrata
AL2G21530 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 9153323-9158322 Arabidopsis lyrata
AL2G21530 5.0kb downstream 5.0kb downstream 6495   true scaffold_2: 9158323-9164817 Arabidopsis lyrata
AL2G21530 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 9159818-9164817 Arabidopsis lyrata
AL2G21530 10.0kb upstream 10.0kb upstream 11495   true scaffold_2: 9148323-9159817 Arabidopsis lyrata
AL2G21530 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 9148323-9158322 Arabidopsis lyrata
AL2G21530 10.0kb downstream 10.0kb downstream 11495   true scaffold_2: 9158323-9169817 Arabidopsis lyrata
AL2G21530 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 9159818-9169817 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377414 5261 Brassicaceae View MSA
123832931 5264 Brassicales-Malvales View MSA
124321832 5266 SBM View MSA
124245266 5268 Malvidae View MSA
124050309 5270 Rosid View MSA
123748831 5271 Pentapetalae View MSA
122795112 5272 Eudicot View MSA
122046539 5273 Angiosperm View MSA
121351197 5274 Embryophyte View MSA
123425549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain