Gene : AL2G21510 A. lyrata v2.1

Defline:  (1 of 3) PTHR15184:SF43 - ATP SYNTHASE SUBUNIT BETA, CHLOROPLASTIC Genomic Order:  984
Name:  ? AL2G21510 Secondary Identifier:  ? PAC:35947356

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6126 Arabidopsis lyrata pathologic  
Alyrata PWY-7219 Arabidopsis lyrata pathologic  
Alyrata PWY-7229 Arabidopsis lyrata pathologic  
Alyrata PWY-841 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G21510 0.5kb upstream 0.5kb upstream 1997   true scaffold_2: 9153841-9155837 Arabidopsis lyrata
AL2G21510 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 9155338-9155837 Arabidopsis lyrata
AL2G21510 0.5kb downstream 0.5kb downstream 1997   true scaffold_2: 9153341-9155337 Arabidopsis lyrata
AL2G21510 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 9153341-9153840 Arabidopsis lyrata
AL2G21510 1.0kb upstream 1.0kb upstream 2497   true scaffold_2: 9153841-9156337 Arabidopsis lyrata
AL2G21510 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 9155338-9156337 Arabidopsis lyrata
AL2G21510 1.0kb downstream 1.0kb downstream 2497   true scaffold_2: 9152841-9155337 Arabidopsis lyrata
AL2G21510 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 9152841-9153840 Arabidopsis lyrata
AL2G21510 2.0kb upstream 2.0kb upstream 3497   true scaffold_2: 9153841-9157337 Arabidopsis lyrata
AL2G21510 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 9155338-9157337 Arabidopsis lyrata
AL2G21510 2.0kb downstream 2.0kb downstream 3497   true scaffold_2: 9151841-9155337 Arabidopsis lyrata
AL2G21510 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 9151841-9153840 Arabidopsis lyrata
AL2G21510 5.0kb upstream 5.0kb upstream 6497   true scaffold_2: 9153841-9160337 Arabidopsis lyrata
AL2G21510 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 9155338-9160337 Arabidopsis lyrata
AL2G21510 5.0kb downstream 5.0kb downstream 6497   true scaffold_2: 9148841-9155337 Arabidopsis lyrata
AL2G21510 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 9148841-9153840 Arabidopsis lyrata
AL2G21510 10.0kb upstream 10.0kb upstream 11497   true scaffold_2: 9153841-9165337 Arabidopsis lyrata
AL2G21510 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 9155338-9165337 Arabidopsis lyrata
AL2G21510 10.0kb downstream 10.0kb downstream 11497   true scaffold_2: 9143841-9155337 Arabidopsis lyrata
AL2G21510 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 9143841-9153840 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328171 5261 Brassicaceae View MSA
123769547 5264 Brassicales-Malvales View MSA
124268105 5266 SBM View MSA
124250549 5268 Malvidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain