Gene : AL2G21380 A. lyrata v2.1

Defline:  (1 of 1) K02689//K02690 - photosystem I P700 chlorophyll a apoprotein A1 (psaA) // photosystem I P700 chlorophyll a apoprotein A2 (psaB) Genomic Order:  975
Name:  ? AL2G21380 Secondary Identifier:  ? PAC:35945043

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G21380 0.5kb upstream 0.5kb upstream 2753   true scaffold_2: 9141590-9144342 Arabidopsis lyrata
AL2G21380 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 9143843-9144342 Arabidopsis lyrata
AL2G21380 0.5kb downstream 0.5kb downstream 2753   true scaffold_2: 9141090-9143842 Arabidopsis lyrata
AL2G21380 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 9141090-9141589 Arabidopsis lyrata
AL2G21380 1.0kb upstream 1.0kb upstream 3253   true scaffold_2: 9141590-9144842 Arabidopsis lyrata
AL2G21380 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 9143843-9144842 Arabidopsis lyrata
AL2G21380 1.0kb downstream 1.0kb downstream 3253   true scaffold_2: 9140590-9143842 Arabidopsis lyrata
AL2G21380 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 9140590-9141589 Arabidopsis lyrata
AL2G21380 2.0kb upstream 2.0kb upstream 4253   true scaffold_2: 9141590-9145842 Arabidopsis lyrata
AL2G21380 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 9143843-9145842 Arabidopsis lyrata
AL2G21380 2.0kb downstream 2.0kb downstream 4253   true scaffold_2: 9139590-9143842 Arabidopsis lyrata
AL2G21380 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 9139590-9141589 Arabidopsis lyrata
AL2G21380 5.0kb upstream 5.0kb upstream 7253   true scaffold_2: 9141590-9148842 Arabidopsis lyrata
AL2G21380 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 9143843-9148842 Arabidopsis lyrata
AL2G21380 5.0kb downstream 5.0kb downstream 7253   true scaffold_2: 9136590-9143842 Arabidopsis lyrata
AL2G21380 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 9136590-9141589 Arabidopsis lyrata
AL2G21380 10.0kb upstream 10.0kb upstream 12253   true scaffold_2: 9141590-9153842 Arabidopsis lyrata
AL2G21380 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 9143843-9153842 Arabidopsis lyrata
AL2G21380 10.0kb downstream 10.0kb downstream 12253   true scaffold_2: 9131590-9143842 Arabidopsis lyrata
AL2G21380 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 9131590-9141589 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029302 5273 Angiosperm View MSA
122376195 5261 Brassicaceae View MSA
123829253 5264 Brassicales-Malvales View MSA
124321585 5266 SBM View MSA
124245218 5268 Malvidae View MSA
124039340 5270 Rosid View MSA
123753575 5271 Pentapetalae View MSA
122795398 5272 Eudicot View MSA
121350541 5274 Embryophyte View MSA
123381782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain