Gene : AL2G22130 A. lyrata v2.1

Defline:  (1 of 2) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6) Genomic Order:  1035
Name:  ? AL2G22130 Secondary Identifier:  ? PAC:35946358

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G22130 0.5kb upstream 0.5kb upstream 8305   true scaffold_2: 9431556-9439860 Arabidopsis lyrata
AL2G22130 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 9439361-9439860 Arabidopsis lyrata
AL2G22130 0.5kb downstream 0.5kb downstream 8305   true scaffold_2: 9431056-9439360 Arabidopsis lyrata
AL2G22130 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 9431056-9431555 Arabidopsis lyrata
AL2G22130 1.0kb upstream 1.0kb upstream 8805   true scaffold_2: 9431556-9440360 Arabidopsis lyrata
AL2G22130 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 9439361-9440360 Arabidopsis lyrata
AL2G22130 1.0kb downstream 1.0kb downstream 8805   true scaffold_2: 9430556-9439360 Arabidopsis lyrata
AL2G22130 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 9430556-9431555 Arabidopsis lyrata
AL2G22130 2.0kb upstream 2.0kb upstream 9805   true scaffold_2: 9431556-9441360 Arabidopsis lyrata
AL2G22130 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 9439361-9441360 Arabidopsis lyrata
AL2G22130 2.0kb downstream 2.0kb downstream 9805   true scaffold_2: 9429556-9439360 Arabidopsis lyrata
AL2G22130 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 9429556-9431555 Arabidopsis lyrata
AL2G22130 5.0kb upstream 5.0kb upstream 12805   true scaffold_2: 9431556-9444360 Arabidopsis lyrata
AL2G22130 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 9439361-9444360 Arabidopsis lyrata
AL2G22130 5.0kb downstream 5.0kb downstream 12805   true scaffold_2: 9426556-9439360 Arabidopsis lyrata
AL2G22130 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 9426556-9431555 Arabidopsis lyrata
AL2G22130 10.0kb upstream 10.0kb upstream 17805   true scaffold_2: 9431556-9449360 Arabidopsis lyrata
AL2G22130 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 9439361-9449360 Arabidopsis lyrata
AL2G22130 10.0kb downstream 10.0kb downstream 17805   true scaffold_2: 9421556-9439360 Arabidopsis lyrata
AL2G22130 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 9421556-9431555 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360860 5261 Brassicaceae View MSA
123837242 5264 Brassicales-Malvales View MSA
124344276 5266 SBM View MSA
124242204 5268 Malvidae View MSA
124072790 5270 Rosid View MSA
123737056 5271 Pentapetalae View MSA
122788563 5272 Eudicot View MSA
122044627 5273 Angiosperm View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain