Gene : AL2G19700 A. lyrata v2.1

Defline:  (1 of 2) 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase Genomic Order:  849
Name:  ? AL2G19700 Secondary Identifier:  ? PAC:35944762

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1121 Arabidopsis lyrata pathologic  
Alyrata PWY1F-FLAVSYN Arabidopsis lyrata pathologic  
Alyrata PWY-361 Arabidopsis lyrata pathologic  
Alyrata PWY-6435 Arabidopsis lyrata pathologic  
Alyrata PWY-6673 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G19700 0.5kb upstream 0.5kb upstream 4729   true scaffold_2: 7976838-7981566 Arabidopsis lyrata
AL2G19700 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 7981067-7981566 Arabidopsis lyrata
AL2G19700 0.5kb downstream 0.5kb downstream 4729   true scaffold_2: 7976338-7981066 Arabidopsis lyrata
AL2G19700 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 7976338-7976837 Arabidopsis lyrata
AL2G19700 1.0kb upstream 1.0kb upstream 5229   true scaffold_2: 7976838-7982066 Arabidopsis lyrata
AL2G19700 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 7981067-7982066 Arabidopsis lyrata
AL2G19700 1.0kb downstream 1.0kb downstream 5229   true scaffold_2: 7975838-7981066 Arabidopsis lyrata
AL2G19700 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 7975838-7976837 Arabidopsis lyrata
AL2G19700 2.0kb upstream 2.0kb upstream 6229   true scaffold_2: 7976838-7983066 Arabidopsis lyrata
AL2G19700 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 7981067-7983066 Arabidopsis lyrata
AL2G19700 2.0kb downstream 2.0kb downstream 6229   true scaffold_2: 7974838-7981066 Arabidopsis lyrata
AL2G19700 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 7974838-7976837 Arabidopsis lyrata
AL2G19700 5.0kb upstream 5.0kb upstream 9229   true scaffold_2: 7976838-7986066 Arabidopsis lyrata
AL2G19700 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 7981067-7986066 Arabidopsis lyrata
AL2G19700 5.0kb downstream 5.0kb downstream 9229   true scaffold_2: 7971838-7981066 Arabidopsis lyrata
AL2G19700 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 7971838-7976837 Arabidopsis lyrata
AL2G19700 10.0kb upstream 10.0kb upstream 14229   true scaffold_2: 7976838-7991066 Arabidopsis lyrata
AL2G19700 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 7981067-7991066 Arabidopsis lyrata
AL2G19700 10.0kb downstream 10.0kb downstream 14229   true scaffold_2: 7966838-7981066 Arabidopsis lyrata
AL2G19700 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 7966838-7976837 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374575 5261 Brassicaceae View MSA
123829315 5264 Brassicales-Malvales View MSA
124337093 5266 SBM View MSA
124239638 5268 Malvidae View MSA
124063529 5270 Rosid View MSA
123738118 5271 Pentapetalae View MSA
122792374 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain