Gene : AL2G23550 A. lyrata v2.1

Defline:  (1 of 4) K01580 - glutamate decarboxylase (E4.1.1.15, gadB, gadA, GAD) Genomic Order:  1149
Name:  ? AL2G23550 Secondary Identifier:  ? PAC:35945628

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUDEG-I-PWY Arabidopsis lyrata pathologic  
Alyrata PWY0-1305 Arabidopsis lyrata pathologic  
Alyrata PWY-4321 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G23550 0.5kb upstream 0.5kb upstream 5662   true scaffold_2: 10555664-10561325 Arabidopsis lyrata
AL2G23550 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 10555664-10556163 Arabidopsis lyrata
AL2G23550 0.5kb downstream 0.5kb downstream 5662   true scaffold_2: 10556164-10561825 Arabidopsis lyrata
AL2G23550 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 10561326-10561825 Arabidopsis lyrata
AL2G23550 1.0kb upstream 1.0kb upstream 6162   true scaffold_2: 10555164-10561325 Arabidopsis lyrata
AL2G23550 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 10555164-10556163 Arabidopsis lyrata
AL2G23550 1.0kb downstream 1.0kb downstream 6162   true scaffold_2: 10556164-10562325 Arabidopsis lyrata
AL2G23550 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 10561326-10562325 Arabidopsis lyrata
AL2G23550 2.0kb upstream 2.0kb upstream 7162   true scaffold_2: 10554164-10561325 Arabidopsis lyrata
AL2G23550 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 10554164-10556163 Arabidopsis lyrata
AL2G23550 2.0kb downstream 2.0kb downstream 7162   true scaffold_2: 10556164-10563325 Arabidopsis lyrata
AL2G23550 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 10561326-10563325 Arabidopsis lyrata
AL2G23550 5.0kb upstream 5.0kb upstream 10162   true scaffold_2: 10551164-10561325 Arabidopsis lyrata
AL2G23550 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 10551164-10556163 Arabidopsis lyrata
AL2G23550 5.0kb downstream 5.0kb downstream 10162   true scaffold_2: 10556164-10566325 Arabidopsis lyrata
AL2G23550 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 10561326-10566325 Arabidopsis lyrata
AL2G23550 10.0kb upstream 10.0kb upstream 15162   true scaffold_2: 10546164-10561325 Arabidopsis lyrata
AL2G23550 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 10546164-10556163 Arabidopsis lyrata
AL2G23550 10.0kb downstream 10.0kb downstream 15162   true scaffold_2: 10556164-10571325 Arabidopsis lyrata
AL2G23550 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 10561326-10571325 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510626 5273 Angiosperm View MSA
122366302 5261 Brassicaceae View MSA
123799145 5264 Brassicales-Malvales View MSA
124296694 5266 SBM View MSA
124148772 5268 Malvidae View MSA
123874705 5270 Rosid View MSA
123458635 5271 Pentapetalae View MSA
122494036 5272 Eudicot View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain