Gene : AL2G23385 A. lyrata v2.1

Defline:  (1 of 4) 1.1.1.42 - Isocitrate dehydrogenase (NADP(+)) / oxalosuccinate carboxylase Genomic Order:  1136
Name:  ? AL2G23385 Secondary Identifier:  ? PAC:35945871

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6549 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G23385 0.5kb upstream 0.5kb upstream 3726   true scaffold_2: 10435017-10438742 Arabidopsis lyrata
AL2G23385 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 10435017-10435516 Arabidopsis lyrata
AL2G23385 0.5kb downstream 0.5kb downstream 3726   true scaffold_2: 10435517-10439242 Arabidopsis lyrata
AL2G23385 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 10438743-10439242 Arabidopsis lyrata
AL2G23385 1.0kb upstream 1.0kb upstream 4226   true scaffold_2: 10434517-10438742 Arabidopsis lyrata
AL2G23385 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 10434517-10435516 Arabidopsis lyrata
AL2G23385 1.0kb downstream 1.0kb downstream 4226   true scaffold_2: 10435517-10439742 Arabidopsis lyrata
AL2G23385 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 10438743-10439742 Arabidopsis lyrata
AL2G23385 2.0kb upstream 2.0kb upstream 5226   true scaffold_2: 10433517-10438742 Arabidopsis lyrata
AL2G23385 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 10433517-10435516 Arabidopsis lyrata
AL2G23385 2.0kb downstream 2.0kb downstream 5226   true scaffold_2: 10435517-10440742 Arabidopsis lyrata
AL2G23385 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 10438743-10440742 Arabidopsis lyrata
AL2G23385 5.0kb upstream 5.0kb upstream 8226   true scaffold_2: 10430517-10438742 Arabidopsis lyrata
AL2G23385 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 10430517-10435516 Arabidopsis lyrata
AL2G23385 5.0kb downstream 5.0kb downstream 8226   true scaffold_2: 10435517-10443742 Arabidopsis lyrata
AL2G23385 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 10438743-10443742 Arabidopsis lyrata
AL2G23385 10.0kb upstream 10.0kb upstream 13226   true scaffold_2: 10425517-10438742 Arabidopsis lyrata
AL2G23385 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 10425517-10435516 Arabidopsis lyrata
AL2G23385 10.0kb downstream 10.0kb downstream 13226   true scaffold_2: 10435517-10448742 Arabidopsis lyrata
AL2G23385 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 10438743-10448742 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375650 5261 Brassicaceae View MSA
123836810 5264 Brassicales-Malvales View MSA
124343936 5266 SBM View MSA
124253615 5268 Malvidae View MSA
124070230 5270 Rosid View MSA
123744673 5271 Pentapetalae View MSA
122792686 5272 Eudicot View MSA
122045414 5273 Angiosperm View MSA
121351363 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain