Gene : AL2G26960 A. lyrata v2.1

Defline:  (1 of 1) PTHR13317:SF4 - TRANSMEMBRANE ANTERIOR POSTERIOR TRANSFORMATION PROTEIN 1 HOMOLOG Genomic Order:  1459
Name:  ? AL2G26960 Secondary Identifier:  ? PAC:35945860

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G26960 0.5kb upstream 0.5kb upstream 3989   true scaffold_2: 12912006-12915994 Arabidopsis lyrata
AL2G26960 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 12912006-12912505 Arabidopsis lyrata
AL2G26960 0.5kb downstream 0.5kb downstream 3989   true scaffold_2: 12912506-12916494 Arabidopsis lyrata
AL2G26960 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 12915995-12916494 Arabidopsis lyrata
AL2G26960 1.0kb upstream 1.0kb upstream 4489   true scaffold_2: 12911506-12915994 Arabidopsis lyrata
AL2G26960 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 12911506-12912505 Arabidopsis lyrata
AL2G26960 1.0kb downstream 1.0kb downstream 4489   true scaffold_2: 12912506-12916994 Arabidopsis lyrata
AL2G26960 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 12915995-12916994 Arabidopsis lyrata
AL2G26960 2.0kb upstream 2.0kb upstream 5489   true scaffold_2: 12910506-12915994 Arabidopsis lyrata
AL2G26960 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 12910506-12912505 Arabidopsis lyrata
AL2G26960 2.0kb downstream 2.0kb downstream 5489   true scaffold_2: 12912506-12917994 Arabidopsis lyrata
AL2G26960 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 12915995-12917994 Arabidopsis lyrata
AL2G26960 5.0kb upstream 5.0kb upstream 8489   true scaffold_2: 12907506-12915994 Arabidopsis lyrata
AL2G26960 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 12907506-12912505 Arabidopsis lyrata
AL2G26960 5.0kb downstream 5.0kb downstream 8489   true scaffold_2: 12912506-12920994 Arabidopsis lyrata
AL2G26960 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 12915995-12920994 Arabidopsis lyrata
AL2G26960 10.0kb upstream 10.0kb upstream 13489   true scaffold_2: 12902506-12915994 Arabidopsis lyrata
AL2G26960 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 12902506-12912505 Arabidopsis lyrata
AL2G26960 10.0kb downstream 10.0kb downstream 13489   true scaffold_2: 12912506-12925994 Arabidopsis lyrata
AL2G26960 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 12915995-12925994 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367944 5261 Brassicaceae View MSA
123835755 5264 Brassicales-Malvales View MSA
124340443 5266 SBM View MSA
124240848 5268 Malvidae View MSA
124068182 5270 Rosid View MSA
123752415 5271 Pentapetalae View MSA
122788398 5272 Eudicot View MSA
122042110 5273 Angiosperm View MSA
121347997 5274 Embryophyte View MSA
123426226 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain