Gene : AL2G26920 A. lyrata v2.1

Defline:  (1 of 1) K00999 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (CDIPT) Genomic Order:  1455
Name:  ? AL2G26920 Secondary Identifier:  ? PAC:35946703

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  
Alyrata PWY-7625 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G26920 0.5kb upstream 0.5kb upstream 2637   true scaffold_2: 12900605-12903241 Arabidopsis lyrata
AL2G26920 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 12902742-12903241 Arabidopsis lyrata
AL2G26920 0.5kb downstream 0.5kb downstream 2637   true scaffold_2: 12900105-12902741 Arabidopsis lyrata
AL2G26920 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 12900105-12900604 Arabidopsis lyrata
AL2G26920 1.0kb upstream 1.0kb upstream 3137   true scaffold_2: 12900605-12903741 Arabidopsis lyrata
AL2G26920 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 12902742-12903741 Arabidopsis lyrata
AL2G26920 1.0kb downstream 1.0kb downstream 3137   true scaffold_2: 12899605-12902741 Arabidopsis lyrata
AL2G26920 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 12899605-12900604 Arabidopsis lyrata
AL2G26920 2.0kb upstream 2.0kb upstream 4137   true scaffold_2: 12900605-12904741 Arabidopsis lyrata
AL2G26920 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 12902742-12904741 Arabidopsis lyrata
AL2G26920 2.0kb downstream 2.0kb downstream 4137   true scaffold_2: 12898605-12902741 Arabidopsis lyrata
AL2G26920 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 12898605-12900604 Arabidopsis lyrata
AL2G26920 5.0kb upstream 5.0kb upstream 7137   true scaffold_2: 12900605-12907741 Arabidopsis lyrata
AL2G26920 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 12902742-12907741 Arabidopsis lyrata
AL2G26920 5.0kb downstream 5.0kb downstream 7137   true scaffold_2: 12895605-12902741 Arabidopsis lyrata
AL2G26920 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 12895605-12900604 Arabidopsis lyrata
AL2G26920 10.0kb upstream 10.0kb upstream 12137   true scaffold_2: 12900605-12912741 Arabidopsis lyrata
AL2G26920 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 12902742-12912741 Arabidopsis lyrata
AL2G26920 10.0kb downstream 10.0kb downstream 12137   true scaffold_2: 12890605-12902741 Arabidopsis lyrata
AL2G26920 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 12890605-12900604 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368141 5261 Brassicaceae View MSA
123837573 5264 Brassicales-Malvales View MSA
124322337 5266 SBM View MSA
124237971 5268 Malvidae View MSA
124074338 5270 Rosid View MSA
123738044 5271 Pentapetalae View MSA
122788491 5272 Eudicot View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain