Gene : AL2G26440 A. lyrata v2.1

Defline:  (1 of 1) K02723 - photosystem II PsbY protein (psbY) Genomic Order:  1410
Name:  ? AL2G26440 Secondary Identifier:  ? PAC:35946155

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G26440 0.5kb upstream 0.5kb upstream 1312   true scaffold_2: 12687812-12689123 Arabidopsis lyrata
AL2G26440 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 12688624-12689123 Arabidopsis lyrata
AL2G26440 0.5kb downstream 0.5kb downstream 1312   true scaffold_2: 12687312-12688623 Arabidopsis lyrata
AL2G26440 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 12687312-12687811 Arabidopsis lyrata
AL2G26440 1.0kb upstream 1.0kb upstream 1812   true scaffold_2: 12687812-12689623 Arabidopsis lyrata
AL2G26440 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 12688624-12689623 Arabidopsis lyrata
AL2G26440 1.0kb downstream 1.0kb downstream 1812   true scaffold_2: 12686812-12688623 Arabidopsis lyrata
AL2G26440 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 12686812-12687811 Arabidopsis lyrata
AL2G26440 2.0kb upstream 2.0kb upstream 2812   true scaffold_2: 12687812-12690623 Arabidopsis lyrata
AL2G26440 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 12688624-12690623 Arabidopsis lyrata
AL2G26440 2.0kb downstream 2.0kb downstream 2812   true scaffold_2: 12685812-12688623 Arabidopsis lyrata
AL2G26440 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 12685812-12687811 Arabidopsis lyrata
AL2G26440 5.0kb upstream 5.0kb upstream 5812   true scaffold_2: 12687812-12693623 Arabidopsis lyrata
AL2G26440 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 12688624-12693623 Arabidopsis lyrata
AL2G26440 5.0kb downstream 5.0kb downstream 5812   true scaffold_2: 12682812-12688623 Arabidopsis lyrata
AL2G26440 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 12682812-12687811 Arabidopsis lyrata
AL2G26440 10.0kb upstream 10.0kb upstream 10812   true scaffold_2: 12687812-12698623 Arabidopsis lyrata
AL2G26440 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 12688624-12698623 Arabidopsis lyrata
AL2G26440 10.0kb downstream 10.0kb downstream 10812   true scaffold_2: 12677812-12688623 Arabidopsis lyrata
AL2G26440 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 12677812-12687811 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361908 5261 Brassicaceae View MSA
123839306 5264 Brassicales-Malvales View MSA
124346092 5266 SBM View MSA
124244103 5268 Malvidae View MSA
124068149 5270 Rosid View MSA
123737018 5271 Pentapetalae View MSA
122795977 5272 Eudicot View MSA
122044260 5273 Angiosperm View MSA
121349394 5274 Embryophyte View MSA
123426328 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain