Gene : AL2G25240 A. lyrata v2.1

Defline:  (1 of 4) 5.4.99.39//5.4.99.40//5.4.99.41 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase // Alpha-amyrin synthase / 2,3-oxidosqualene alpha-amyrin cyclase // Lupeol synthase Genomic Order:  1300
Name:  ? AL2G25240 Secondary Identifier:  ? PAC:35945577

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-112 Arabidopsis lyrata pathologic  
Alyrata PWY-5377 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G25240 0.5kb upstream 0.5kb upstream 10858   true scaffold_2: 11984750-11995607 Arabidopsis lyrata
AL2G25240 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 11995108-11995607 Arabidopsis lyrata
AL2G25240 0.5kb downstream 0.5kb downstream 10858   true scaffold_2: 11984250-11995107 Arabidopsis lyrata
AL2G25240 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 11984250-11984749 Arabidopsis lyrata
AL2G25240 1.0kb upstream 1.0kb upstream 11358   true scaffold_2: 11984750-11996107 Arabidopsis lyrata
AL2G25240 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 11995108-11996107 Arabidopsis lyrata
AL2G25240 1.0kb downstream 1.0kb downstream 11358   true scaffold_2: 11983750-11995107 Arabidopsis lyrata
AL2G25240 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 11983750-11984749 Arabidopsis lyrata
AL2G25240 2.0kb upstream 2.0kb upstream 12358   true scaffold_2: 11984750-11997107 Arabidopsis lyrata
AL2G25240 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 11995108-11997107 Arabidopsis lyrata
AL2G25240 2.0kb downstream 2.0kb downstream 12358   true scaffold_2: 11982750-11995107 Arabidopsis lyrata
AL2G25240 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 11982750-11984749 Arabidopsis lyrata
AL2G25240 5.0kb upstream 5.0kb upstream 15358   true scaffold_2: 11984750-12000107 Arabidopsis lyrata
AL2G25240 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 11995108-12000107 Arabidopsis lyrata
AL2G25240 5.0kb downstream 5.0kb downstream 15358   true scaffold_2: 11979750-11995107 Arabidopsis lyrata
AL2G25240 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 11979750-11984749 Arabidopsis lyrata
AL2G25240 10.0kb upstream 10.0kb upstream 20358   true scaffold_2: 11984750-12005107 Arabidopsis lyrata
AL2G25240 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 11995108-12005107 Arabidopsis lyrata
AL2G25240 10.0kb downstream 10.0kb downstream 20358   true scaffold_2: 11974750-11995107 Arabidopsis lyrata
AL2G25240 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 11974750-11984749 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328303 5261 Brassicaceae View MSA
123841762 5264 Brassicales-Malvales View MSA
124323011 5266 SBM View MSA
124255256 5268 Malvidae View MSA
124075439 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain