Gene : AL2G35250 A. lyrata v2.1

Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  2235
Name:  ? AL2G35250 Secondary Identifier:  ? PAC:35945553

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ARGSYNBSUB-PWY Arabidopsis lyrata pathologic  
Alyrata ARGSYN-PWY Arabidopsis lyrata pathologic  
Alyrata CITRULBIO-PWY Arabidopsis lyrata pathologic  
Alyrata CITRULLINE-DEG-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-4984 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G35250 0.5kb upstream 0.5kb upstream 4159   true scaffold_2: 16640353-16644511 Arabidopsis lyrata
AL2G35250 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 16644012-16644511 Arabidopsis lyrata
AL2G35250 0.5kb downstream 0.5kb downstream 4159   true scaffold_2: 16639853-16644011 Arabidopsis lyrata
AL2G35250 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 16639853-16640352 Arabidopsis lyrata
AL2G35250 1.0kb upstream 1.0kb upstream 4659   true scaffold_2: 16640353-16645011 Arabidopsis lyrata
AL2G35250 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 16644012-16645011 Arabidopsis lyrata
AL2G35250 1.0kb downstream 1.0kb downstream 4659   true scaffold_2: 16639353-16644011 Arabidopsis lyrata
AL2G35250 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 16639353-16640352 Arabidopsis lyrata
AL2G35250 2.0kb upstream 2.0kb upstream 5659   true scaffold_2: 16640353-16646011 Arabidopsis lyrata
AL2G35250 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 16644012-16646011 Arabidopsis lyrata
AL2G35250 2.0kb downstream 2.0kb downstream 5659   true scaffold_2: 16638353-16644011 Arabidopsis lyrata
AL2G35250 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 16638353-16640352 Arabidopsis lyrata
AL2G35250 5.0kb upstream 5.0kb upstream 8659   true scaffold_2: 16640353-16649011 Arabidopsis lyrata
AL2G35250 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 16644012-16649011 Arabidopsis lyrata
AL2G35250 5.0kb downstream 5.0kb downstream 8659   true scaffold_2: 16635353-16644011 Arabidopsis lyrata
AL2G35250 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 16635353-16640352 Arabidopsis lyrata
AL2G35250 10.0kb upstream 10.0kb upstream 13659   true scaffold_2: 16640353-16654011 Arabidopsis lyrata
AL2G35250 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 16644012-16654011 Arabidopsis lyrata
AL2G35250 10.0kb downstream 10.0kb downstream 13659   true scaffold_2: 16630353-16644011 Arabidopsis lyrata
AL2G35250 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 16630353-16640352 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365362 5261 Brassicaceae View MSA
123830074 5264 Brassicales-Malvales View MSA
124343183 5266 SBM View MSA
124239745 5268 Malvidae View MSA
124068629 5270 Rosid View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain