Gene : AL2G34230 A. lyrata v2.1

Defline:  (1 of 5) K08238 - xyloglucan 6-xylosyltransferase [EC:2.4.2.39] Xyl a1-6 Glc (XXT) Genomic Order:  2140
Name:  ? AL2G34230 Secondary Identifier:  ? PAC:35946024

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5936 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G34230 0.5kb upstream 0.5kb upstream 2328   true scaffold_2: 16254176-16256503 Arabidopsis lyrata
AL2G34230 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 16254176-16254675 Arabidopsis lyrata
AL2G34230 0.5kb downstream 0.5kb downstream 2328   true scaffold_2: 16254676-16257003 Arabidopsis lyrata
AL2G34230 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 16256504-16257003 Arabidopsis lyrata
AL2G34230 1.0kb upstream 1.0kb upstream 2828   true scaffold_2: 16253676-16256503 Arabidopsis lyrata
AL2G34230 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 16253676-16254675 Arabidopsis lyrata
AL2G34230 1.0kb downstream 1.0kb downstream 2828   true scaffold_2: 16254676-16257503 Arabidopsis lyrata
AL2G34230 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 16256504-16257503 Arabidopsis lyrata
AL2G34230 2.0kb upstream 2.0kb upstream 3828   true scaffold_2: 16252676-16256503 Arabidopsis lyrata
AL2G34230 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 16252676-16254675 Arabidopsis lyrata
AL2G34230 2.0kb downstream 2.0kb downstream 3828   true scaffold_2: 16254676-16258503 Arabidopsis lyrata
AL2G34230 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 16256504-16258503 Arabidopsis lyrata
AL2G34230 5.0kb upstream 5.0kb upstream 6828   true scaffold_2: 16249676-16256503 Arabidopsis lyrata
AL2G34230 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 16249676-16254675 Arabidopsis lyrata
AL2G34230 5.0kb downstream 5.0kb downstream 6828   true scaffold_2: 16254676-16261503 Arabidopsis lyrata
AL2G34230 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 16256504-16261503 Arabidopsis lyrata
AL2G34230 10.0kb upstream 10.0kb upstream 11828   true scaffold_2: 16244676-16256503 Arabidopsis lyrata
AL2G34230 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 16244676-16254675 Arabidopsis lyrata
AL2G34230 10.0kb downstream 10.0kb downstream 11828   true scaffold_2: 16254676-16266503 Arabidopsis lyrata
AL2G34230 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 16256504-16266503 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374059 5261 Brassicaceae View MSA
123839780 5264 Brassicales-Malvales View MSA
124338371 5266 SBM View MSA
124251626 5268 Malvidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain