Gene : AL2G37980 A. lyrata v2.1

Defline:  (1 of 2) K02952 - small subunit ribosomal protein S13 (RP-S13, rpsM) Genomic Order:  2490
Name:  ? AL2G37980 Secondary Identifier:  ? PAC:35945766

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G37980 0.5kb upstream 0.5kb upstream 1953   true scaffold_2: 17793956-17795908 Arabidopsis lyrata
AL2G37980 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 17795409-17795908 Arabidopsis lyrata
AL2G37980 0.5kb downstream 0.5kb downstream 1953   true scaffold_2: 17793456-17795408 Arabidopsis lyrata
AL2G37980 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 17793456-17793955 Arabidopsis lyrata
AL2G37980 1.0kb upstream 1.0kb upstream 2453   true scaffold_2: 17793956-17796408 Arabidopsis lyrata
AL2G37980 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 17795409-17796408 Arabidopsis lyrata
AL2G37980 1.0kb downstream 1.0kb downstream 2453   true scaffold_2: 17792956-17795408 Arabidopsis lyrata
AL2G37980 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 17792956-17793955 Arabidopsis lyrata
AL2G37980 2.0kb upstream 2.0kb upstream 3453   true scaffold_2: 17793956-17797408 Arabidopsis lyrata
AL2G37980 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 17795409-17797408 Arabidopsis lyrata
AL2G37980 2.0kb downstream 2.0kb downstream 3453   true scaffold_2: 17791956-17795408 Arabidopsis lyrata
AL2G37980 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 17791956-17793955 Arabidopsis lyrata
AL2G37980 5.0kb upstream 5.0kb upstream 6453   true scaffold_2: 17793956-17800408 Arabidopsis lyrata
AL2G37980 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 17795409-17800408 Arabidopsis lyrata
AL2G37980 5.0kb downstream 5.0kb downstream 6453   true scaffold_2: 17788956-17795408 Arabidopsis lyrata
AL2G37980 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 17788956-17793955 Arabidopsis lyrata
AL2G37980 10.0kb upstream 10.0kb upstream 11453   true scaffold_2: 17793956-17805408 Arabidopsis lyrata
AL2G37980 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 17795409-17805408 Arabidopsis lyrata
AL2G37980 10.0kb downstream 10.0kb downstream 11453   true scaffold_2: 17783956-17795408 Arabidopsis lyrata
AL2G37980 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 17783956-17793955 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365340 5261 Brassicaceae View MSA
123833100 5264 Brassicales-Malvales View MSA
124343727 5266 SBM View MSA
124238781 5268 Malvidae View MSA
124067573 5270 Rosid View MSA
123740403 5271 Pentapetalae View MSA
122788158 5272 Eudicot View MSA
122043008 5273 Angiosperm View MSA
121343902 5274 Embryophyte View MSA
123426379 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain