Gene : AL2G38340 A. lyrata v2.1

Defline:  (1 of 2) K01834 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM, gpmA) Genomic Order:  2524
Name:  ? AL2G38340 Secondary Identifier:  ? PAC:35946735

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ANAEROFRUCAT-PWY Arabidopsis lyrata pathologic  
Alyrata ANAGLYCOLYSIS-PWY Arabidopsis lyrata pathologic  
Alyrata PWY66-399 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G38340 0.5kb upstream 0.5kb upstream 2427   true scaffold_2: 17954134-17956560 Arabidopsis lyrata
AL2G38340 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 17954134-17954633 Arabidopsis lyrata
AL2G38340 0.5kb downstream 0.5kb downstream 2427   true scaffold_2: 17954634-17957060 Arabidopsis lyrata
AL2G38340 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 17956561-17957060 Arabidopsis lyrata
AL2G38340 1.0kb upstream 1.0kb upstream 2927   true scaffold_2: 17953634-17956560 Arabidopsis lyrata
AL2G38340 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 17953634-17954633 Arabidopsis lyrata
AL2G38340 1.0kb downstream 1.0kb downstream 2927   true scaffold_2: 17954634-17957560 Arabidopsis lyrata
AL2G38340 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 17956561-17957560 Arabidopsis lyrata
AL2G38340 2.0kb upstream 2.0kb upstream 3927   true scaffold_2: 17952634-17956560 Arabidopsis lyrata
AL2G38340 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 17952634-17954633 Arabidopsis lyrata
AL2G38340 2.0kb downstream 2.0kb downstream 3927   true scaffold_2: 17954634-17958560 Arabidopsis lyrata
AL2G38340 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 17956561-17958560 Arabidopsis lyrata
AL2G38340 5.0kb upstream 5.0kb upstream 6927   true scaffold_2: 17949634-17956560 Arabidopsis lyrata
AL2G38340 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 17949634-17954633 Arabidopsis lyrata
AL2G38340 5.0kb downstream 5.0kb downstream 6927   true scaffold_2: 17954634-17961560 Arabidopsis lyrata
AL2G38340 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 17956561-17961560 Arabidopsis lyrata
AL2G38340 10.0kb upstream 10.0kb upstream 11927   true scaffold_2: 17944634-17956560 Arabidopsis lyrata
AL2G38340 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 17944634-17954633 Arabidopsis lyrata
AL2G38340 10.0kb downstream 10.0kb downstream 11927   true scaffold_2: 17954634-17966560 Arabidopsis lyrata
AL2G38340 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 17956561-17966560 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373672 5261 Brassicaceae View MSA
123800597 5264 Brassicales-Malvales View MSA
124297995 5266 SBM View MSA
124251254 5268 Malvidae View MSA
124065528 5270 Rosid View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain