Gene : AL231U10020 A. lyrata v2.1
Defline:  (1 of 4) PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Genomic Order:  2
Name:  ? AL231U10020 Secondary Identifier:  ? PAC:35947752
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL231U10020 0.5kb upstream 0.5kb upstream 1346   true scaffold_231: 10676-12021 Arabidopsis lyrata
AL231U10020 0.5kb upstream 0.5kb upstream 500   false scaffold_231: 10676-11175 Arabidopsis lyrata
AL231U10020 0.5kb downstream 0.5kb downstream 848   true scaffold_231: 11176-12023 Arabidopsis lyrata
AL231U10020 0.5kb downstream 0.5kb downstream 2   false scaffold_231: 12022-12023 Arabidopsis lyrata
AL231U10020 1.0kb upstream 1.0kb upstream 1846   true scaffold_231: 10176-12021 Arabidopsis lyrata
AL231U10020 1.0kb upstream 1.0kb upstream 1000   false scaffold_231: 10176-11175 Arabidopsis lyrata
AL231U10020 1.0kb downstream 1.0kb downstream 848   true scaffold_231: 11176-12023 Arabidopsis lyrata
AL231U10020 1.0kb downstream 1.0kb downstream 2   false scaffold_231: 12022-12023 Arabidopsis lyrata
AL231U10020 2.0kb upstream 2.0kb upstream 2846   true scaffold_231: 9176-12021 Arabidopsis lyrata
AL231U10020 2.0kb upstream 2.0kb upstream 2000   false scaffold_231: 9176-11175 Arabidopsis lyrata
AL231U10020 2.0kb downstream 2.0kb downstream 848   true scaffold_231: 11176-12023 Arabidopsis lyrata
AL231U10020 2.0kb downstream 2.0kb downstream 2   false scaffold_231: 12022-12023 Arabidopsis lyrata
AL231U10020 5.0kb upstream 5.0kb upstream 5846   true scaffold_231: 6176-12021 Arabidopsis lyrata
AL231U10020 5.0kb upstream 5.0kb upstream 5000   false scaffold_231: 6176-11175 Arabidopsis lyrata
AL231U10020 5.0kb downstream 5.0kb downstream 848   true scaffold_231: 11176-12023 Arabidopsis lyrata
AL231U10020 5.0kb downstream 5.0kb downstream 2   false scaffold_231: 12022-12023 Arabidopsis lyrata
AL231U10020 10.0kb upstream 10.0kb upstream 10846   true scaffold_231: 1176-12021 Arabidopsis lyrata
AL231U10020 10.0kb upstream 10.0kb upstream 10000   false scaffold_231: 1176-11175 Arabidopsis lyrata
AL231U10020 10.0kb downstream 10.0kb downstream 848   true scaffold_231: 11176-12023 Arabidopsis lyrata
AL231U10020 10.0kb downstream 10.0kb downstream 2   false scaffold_231: 12022-12023 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122326524 5261 Brassicaceae Singleton cluster - no MSA
123834982 5264 Brassicales-Malvales View MSA
124321985 5266 SBM View MSA
124169063 5268 Malvidae View MSA
124040291 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain