Gene : AL205U10020 A. lyrata v2.1
Defline:  (1 of 2) PTHR31636:SF4 - SCARECROW-LIKE PROTEIN 8 Genomic Order:  2
Name:  ? AL205U10020 Secondary Identifier:  ? PAC:35925469
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL205U10020 0.5kb upstream 0.5kb upstream 2900   true scaffold_205: 7676-10575 Arabidopsis lyrata
AL205U10020 0.5kb upstream 0.5kb upstream 500   false scaffold_205: 7676-8175 Arabidopsis lyrata
AL205U10020 0.5kb downstream 0.5kb downstream 2900   true scaffold_205: 8176-11075 Arabidopsis lyrata
AL205U10020 0.5kb downstream 0.5kb downstream 500   false scaffold_205: 10576-11075 Arabidopsis lyrata
AL205U10020 1.0kb upstream 1.0kb upstream 3400   true scaffold_205: 7176-10575 Arabidopsis lyrata
AL205U10020 1.0kb upstream 1.0kb upstream 1000   false scaffold_205: 7176-8175 Arabidopsis lyrata
AL205U10020 1.0kb downstream 1.0kb downstream 3400   true scaffold_205: 8176-11575 Arabidopsis lyrata
AL205U10020 1.0kb downstream 1.0kb downstream 1000   false scaffold_205: 10576-11575 Arabidopsis lyrata
AL205U10020 2.0kb upstream 2.0kb upstream 4400   true scaffold_205: 6176-10575 Arabidopsis lyrata
AL205U10020 2.0kb upstream 2.0kb upstream 2000   false scaffold_205: 6176-8175 Arabidopsis lyrata
AL205U10020 2.0kb downstream 2.0kb downstream 4400   true scaffold_205: 8176-12575 Arabidopsis lyrata
AL205U10020 2.0kb downstream 2.0kb downstream 2000   false scaffold_205: 10576-12575 Arabidopsis lyrata
AL205U10020 5.0kb upstream 5.0kb upstream 7400   true scaffold_205: 3176-10575 Arabidopsis lyrata
AL205U10020 5.0kb upstream 5.0kb upstream 5000   false scaffold_205: 3176-8175 Arabidopsis lyrata
AL205U10020 5.0kb downstream 5.0kb downstream 4862   true scaffold_205: 8176-13037 Arabidopsis lyrata
AL205U10020 5.0kb downstream 5.0kb downstream 2462   false scaffold_205: 10576-13037 Arabidopsis lyrata
AL205U10020 10.0kb upstream 10.0kb upstream 10575   true scaffold_205: 1-10575 Arabidopsis lyrata
AL205U10020 10.0kb upstream 10.0kb upstream 8175   false scaffold_205: 1-8175 Arabidopsis lyrata
AL205U10020 10.0kb downstream 10.0kb downstream 4862   true scaffold_205: 8176-13037 Arabidopsis lyrata
AL205U10020 10.0kb downstream 10.0kb downstream 2462   false scaffold_205: 10576-13037 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122323340 5261 Brassicaceae Singleton cluster - no MSA
123841835 5264 Brassicales-Malvales View MSA
124323062 5266 SBM View MSA
124169313 5268 Malvidae View MSA
124040533 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain