Gene : AL201U10010 A. lyrata v2.1
Defline:  (1 of 3) PTHR31165:SF6 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 Genomic Order:  1
Name:  ? AL201U10010 Secondary Identifier:  ? PAC:35925449
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL201U10010 0.5kb upstream 0.5kb upstream 1380   true scaffold_201: 1412-2791 Arabidopsis lyrata
AL201U10010 0.5kb upstream 0.5kb upstream 500   false scaffold_201: 2292-2791 Arabidopsis lyrata
AL201U10010 0.5kb downstream 0.5kb downstream 1380   true scaffold_201: 912-2291 Arabidopsis lyrata
AL201U10010 0.5kb downstream 0.5kb downstream 500   false scaffold_201: 912-1411 Arabidopsis lyrata
AL201U10010 1.0kb upstream 1.0kb upstream 1880   true scaffold_201: 1412-3291 Arabidopsis lyrata
AL201U10010 1.0kb upstream 1.0kb upstream 1000   false scaffold_201: 2292-3291 Arabidopsis lyrata
AL201U10010 1.0kb downstream 1.0kb downstream 1880   true scaffold_201: 412-2291 Arabidopsis lyrata
AL201U10010 1.0kb downstream 1.0kb downstream 1000   false scaffold_201: 412-1411 Arabidopsis lyrata
AL201U10010 2.0kb upstream 2.0kb upstream 2880   true scaffold_201: 1412-4291 Arabidopsis lyrata
AL201U10010 2.0kb upstream 2.0kb upstream 2000   false scaffold_201: 2292-4291 Arabidopsis lyrata
AL201U10010 2.0kb downstream 2.0kb downstream 2291   true scaffold_201: 1-2291 Arabidopsis lyrata
AL201U10010 2.0kb downstream 2.0kb downstream 1411   false scaffold_201: 1-1411 Arabidopsis lyrata
AL201U10010 5.0kb upstream 5.0kb upstream 5880   true scaffold_201: 1412-7291 Arabidopsis lyrata
AL201U10010 5.0kb upstream 5.0kb upstream 5000   false scaffold_201: 2292-7291 Arabidopsis lyrata
AL201U10010 5.0kb downstream 5.0kb downstream 2291   true scaffold_201: 1-2291 Arabidopsis lyrata
AL201U10010 5.0kb downstream 5.0kb downstream 1411   false scaffold_201: 1-1411 Arabidopsis lyrata
AL201U10010 10.0kb upstream 10.0kb upstream 10880   true scaffold_201: 1412-12291 Arabidopsis lyrata
AL201U10010 10.0kb upstream 10.0kb upstream 10000   false scaffold_201: 2292-12291 Arabidopsis lyrata
AL201U10010 10.0kb downstream 10.0kb downstream 2291   true scaffold_201: 1-2291 Arabidopsis lyrata
AL201U10010 10.0kb downstream 10.0kb downstream 1411   false scaffold_201: 1-1411 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377748 5261 Brassicaceae View MSA
123801623 5264 Brassicales-Malvales View MSA
124349732 5266 SBM View MSA
124237471 5268 Malvidae View MSA
124067272 5270 Rosid View MSA
123741885 5271 Pentapetalae View MSA
122789357 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain