Gene : AL3G11890 A. lyrata v2.1
Defline:  (1 of 4) K09498 - T-complex protein 1 subunit zeta (CCT6) Genomic Order:  181
Name:  ? AL3G11890 Secondary Identifier:  ? PAC:35940149
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G11890 0.5kb upstream 0.5kb upstream 4374   true scaffold_3: 649847-654220 Arabidopsis lyrata
AL3G11890 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 653721-654220 Arabidopsis lyrata
AL3G11890 0.5kb downstream 0.5kb downstream 4374   true scaffold_3: 649347-653720 Arabidopsis lyrata
AL3G11890 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 649347-649846 Arabidopsis lyrata
AL3G11890 1.0kb upstream 1.0kb upstream 4874   true scaffold_3: 649847-654720 Arabidopsis lyrata
AL3G11890 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 653721-654720 Arabidopsis lyrata
AL3G11890 1.0kb downstream 1.0kb downstream 4874   true scaffold_3: 648847-653720 Arabidopsis lyrata
AL3G11890 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 648847-649846 Arabidopsis lyrata
AL3G11890 2.0kb upstream 2.0kb upstream 5874   true scaffold_3: 649847-655720 Arabidopsis lyrata
AL3G11890 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 653721-655720 Arabidopsis lyrata
AL3G11890 2.0kb downstream 2.0kb downstream 5874   true scaffold_3: 647847-653720 Arabidopsis lyrata
AL3G11890 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 647847-649846 Arabidopsis lyrata
AL3G11890 5.0kb upstream 5.0kb upstream 8874   true scaffold_3: 649847-658720 Arabidopsis lyrata
AL3G11890 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 653721-658720 Arabidopsis lyrata
AL3G11890 5.0kb downstream 5.0kb downstream 8874   true scaffold_3: 644847-653720 Arabidopsis lyrata
AL3G11890 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 644847-649846 Arabidopsis lyrata
AL3G11890 10.0kb upstream 10.0kb upstream 13874   true scaffold_3: 649847-663720 Arabidopsis lyrata
AL3G11890 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 653721-663720 Arabidopsis lyrata
AL3G11890 10.0kb downstream 10.0kb downstream 13874   true scaffold_3: 639847-653720 Arabidopsis lyrata
AL3G11890 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 639847-649846 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372192 5261 Brassicaceae View MSA
123828203 5264 Brassicales-Malvales View MSA
124344657 5266 SBM View MSA
124238040 5268 Malvidae View MSA
124066156 5270 Rosid View MSA
123744812 5271 Pentapetalae View MSA
122790863 5272 Eudicot View MSA
122045313 5273 Angiosperm View MSA
121344896 5274 Embryophyte View MSA
123424625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain