Gene : AL3G11660 A. lyrata v2.1

Defline:  (1 of 3) 1.1.1.44 - Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) / Phosphogluconic acid dehydrogenase Genomic Order:  158
Name:  ? AL3G11660 Secondary Identifier:  ? PAC:35942562

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata OXIDATIVEPENT-PWY Arabidopsis lyrata pathologic  
Alyrata PENTOSE-P-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G11660 0.5kb upstream 0.5kb upstream 2673   true scaffold_3: 577345-580017 Arabidopsis lyrata
AL3G11660 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 577345-577844 Arabidopsis lyrata
AL3G11660 0.5kb downstream 0.5kb downstream 2673   true scaffold_3: 577845-580517 Arabidopsis lyrata
AL3G11660 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 580018-580517 Arabidopsis lyrata
AL3G11660 1.0kb upstream 1.0kb upstream 3173   true scaffold_3: 576845-580017 Arabidopsis lyrata
AL3G11660 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 576845-577844 Arabidopsis lyrata
AL3G11660 1.0kb downstream 1.0kb downstream 3173   true scaffold_3: 577845-581017 Arabidopsis lyrata
AL3G11660 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 580018-581017 Arabidopsis lyrata
AL3G11660 2.0kb upstream 2.0kb upstream 4173   true scaffold_3: 575845-580017 Arabidopsis lyrata
AL3G11660 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 575845-577844 Arabidopsis lyrata
AL3G11660 2.0kb downstream 2.0kb downstream 4173   true scaffold_3: 577845-582017 Arabidopsis lyrata
AL3G11660 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 580018-582017 Arabidopsis lyrata
AL3G11660 5.0kb upstream 5.0kb upstream 7173   true scaffold_3: 572845-580017 Arabidopsis lyrata
AL3G11660 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 572845-577844 Arabidopsis lyrata
AL3G11660 5.0kb downstream 5.0kb downstream 7173   true scaffold_3: 577845-585017 Arabidopsis lyrata
AL3G11660 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 580018-585017 Arabidopsis lyrata
AL3G11660 10.0kb upstream 10.0kb upstream 12173   true scaffold_3: 567845-580017 Arabidopsis lyrata
AL3G11660 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 567845-577844 Arabidopsis lyrata
AL3G11660 10.0kb downstream 10.0kb downstream 12173   true scaffold_3: 577845-590017 Arabidopsis lyrata
AL3G11660 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 580018-590017 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367154 5261 Brassicaceae View MSA
123835743 5264 Brassicales-Malvales View MSA
124350427 5266 SBM View MSA
124251436 5268 Malvidae View MSA
124067916 5270 Rosid View MSA
123746005 5271 Pentapetalae View MSA
122793535 5272 Eudicot View MSA
122047871 5273 Angiosperm View MSA
121351017 5274 Embryophyte View MSA
123424238 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain