Gene : AL3G11670 A. lyrata v2.1
Defline:  (1 of 2) K15326 - tRNA-splicing endonuclease subunit Sen54 (TSEN54) Genomic Order:  159
Name:  ? AL3G11670 Secondary Identifier:  ? PAC:35942650
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G11670 0.5kb upstream 0.5kb upstream 1781   true scaffold_3: 579805-581585 Arabidopsis lyrata
AL3G11670 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 579805-580304 Arabidopsis lyrata
AL3G11670 0.5kb downstream 0.5kb downstream 1781   true scaffold_3: 580305-582085 Arabidopsis lyrata
AL3G11670 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 581586-582085 Arabidopsis lyrata
AL3G11670 1.0kb upstream 1.0kb upstream 2281   true scaffold_3: 579305-581585 Arabidopsis lyrata
AL3G11670 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 579305-580304 Arabidopsis lyrata
AL3G11670 1.0kb downstream 1.0kb downstream 2281   true scaffold_3: 580305-582585 Arabidopsis lyrata
AL3G11670 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 581586-582585 Arabidopsis lyrata
AL3G11670 2.0kb upstream 2.0kb upstream 3281   true scaffold_3: 578305-581585 Arabidopsis lyrata
AL3G11670 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 578305-580304 Arabidopsis lyrata
AL3G11670 2.0kb downstream 2.0kb downstream 3281   true scaffold_3: 580305-583585 Arabidopsis lyrata
AL3G11670 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 581586-583585 Arabidopsis lyrata
AL3G11670 5.0kb upstream 5.0kb upstream 6281   true scaffold_3: 575305-581585 Arabidopsis lyrata
AL3G11670 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 575305-580304 Arabidopsis lyrata
AL3G11670 5.0kb downstream 5.0kb downstream 6281   true scaffold_3: 580305-586585 Arabidopsis lyrata
AL3G11670 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 581586-586585 Arabidopsis lyrata
AL3G11670 10.0kb upstream 10.0kb upstream 11281   true scaffold_3: 570305-581585 Arabidopsis lyrata
AL3G11670 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 570305-580304 Arabidopsis lyrata
AL3G11670 10.0kb downstream 10.0kb downstream 11281   true scaffold_3: 580305-591585 Arabidopsis lyrata
AL3G11670 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 581586-591585 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327824 5261 Brassicaceae View MSA
123769223 5264 Brassicales-Malvales View MSA
124267794 5266 SBM View MSA
124243740 5268 Malvidae View MSA
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain