Gene : AL3G12030 A. lyrata v2.1
Defline:  (1 of 186) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  194
Name:  ? AL3G12030 Secondary Identifier:  ? PAC:35941482
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G12030 0.5kb upstream 0.5kb upstream 2622   true scaffold_3: 695587-698208 Arabidopsis lyrata
AL3G12030 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 695587-696086 Arabidopsis lyrata
AL3G12030 0.5kb downstream 0.5kb downstream 2622   true scaffold_3: 696087-698708 Arabidopsis lyrata
AL3G12030 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 698209-698708 Arabidopsis lyrata
AL3G12030 1.0kb upstream 1.0kb upstream 3122   true scaffold_3: 695087-698208 Arabidopsis lyrata
AL3G12030 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 695087-696086 Arabidopsis lyrata
AL3G12030 1.0kb downstream 1.0kb downstream 3122   true scaffold_3: 696087-699208 Arabidopsis lyrata
AL3G12030 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 698209-699208 Arabidopsis lyrata
AL3G12030 2.0kb upstream 2.0kb upstream 4122   true scaffold_3: 694087-698208 Arabidopsis lyrata
AL3G12030 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 694087-696086 Arabidopsis lyrata
AL3G12030 2.0kb downstream 2.0kb downstream 4122   true scaffold_3: 696087-700208 Arabidopsis lyrata
AL3G12030 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 698209-700208 Arabidopsis lyrata
AL3G12030 5.0kb upstream 5.0kb upstream 7122   true scaffold_3: 691087-698208 Arabidopsis lyrata
AL3G12030 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 691087-696086 Arabidopsis lyrata
AL3G12030 5.0kb downstream 5.0kb downstream 7122   true scaffold_3: 696087-703208 Arabidopsis lyrata
AL3G12030 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 698209-703208 Arabidopsis lyrata
AL3G12030 10.0kb upstream 10.0kb upstream 12122   true scaffold_3: 686087-698208 Arabidopsis lyrata
AL3G12030 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 686087-696086 Arabidopsis lyrata
AL3G12030 10.0kb downstream 10.0kb downstream 12122   true scaffold_3: 696087-708208 Arabidopsis lyrata
AL3G12030 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 698209-708208 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368808 5261 Brassicaceae View MSA
123840230 5264 Brassicales-Malvales View MSA
124343591 5266 SBM View MSA
124242497 5268 Malvidae View MSA
124067728 5270 Rosid View MSA
123742188 5271 Pentapetalae View MSA
122792936 5272 Eudicot View MSA
122045505 5273 Angiosperm View MSA
121310455 5274 Embryophyte View MSA
123347933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain