Gene : AL3G11260 A. lyrata v2.1

Defline:  (1 of 5) 1.1.1.22 - UDP-glucose 6-dehydrogenase Genomic Order:  123
Name:  ? AL3G11260 Secondary Identifier:  ? PAC:35942605

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4821 Arabidopsis lyrata pathologic  
Alyrata PWY-7346 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G11260 0.5kb upstream 0.5kb upstream 2673   true scaffold_3: 429793-432465 Arabidopsis lyrata
AL3G11260 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 431966-432465 Arabidopsis lyrata
AL3G11260 0.5kb downstream 0.5kb downstream 2673   true scaffold_3: 429293-431965 Arabidopsis lyrata
AL3G11260 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 429293-429792 Arabidopsis lyrata
AL3G11260 1.0kb upstream 1.0kb upstream 3173   true scaffold_3: 429793-432965 Arabidopsis lyrata
AL3G11260 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 431966-432965 Arabidopsis lyrata
AL3G11260 1.0kb downstream 1.0kb downstream 3173   true scaffold_3: 428793-431965 Arabidopsis lyrata
AL3G11260 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 428793-429792 Arabidopsis lyrata
AL3G11260 2.0kb upstream 2.0kb upstream 4173   true scaffold_3: 429793-433965 Arabidopsis lyrata
AL3G11260 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 431966-433965 Arabidopsis lyrata
AL3G11260 2.0kb downstream 2.0kb downstream 4173   true scaffold_3: 427793-431965 Arabidopsis lyrata
AL3G11260 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 427793-429792 Arabidopsis lyrata
AL3G11260 5.0kb upstream 5.0kb upstream 7173   true scaffold_3: 429793-436965 Arabidopsis lyrata
AL3G11260 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 431966-436965 Arabidopsis lyrata
AL3G11260 5.0kb downstream 5.0kb downstream 7173   true scaffold_3: 424793-431965 Arabidopsis lyrata
AL3G11260 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 424793-429792 Arabidopsis lyrata
AL3G11260 10.0kb upstream 10.0kb upstream 12173   true scaffold_3: 429793-441965 Arabidopsis lyrata
AL3G11260 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 431966-441965 Arabidopsis lyrata
AL3G11260 10.0kb downstream 10.0kb downstream 12173   true scaffold_3: 419793-431965 Arabidopsis lyrata
AL3G11260 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 419793-429792 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343351 5261 Brassicaceae View MSA
123783581 5264 Brassicales-Malvales View MSA
124349815 5266 SBM View MSA
124253382 5268 Malvidae View MSA
124072920 5270 Rosid View MSA
123748185 5271 Pentapetalae View MSA
122786809 5272 Eudicot View MSA
122047797 5273 Angiosperm View MSA
121346775 5274 Embryophyte View MSA
123428129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain