Gene : AL3G11080 A. lyrata v2.1
Defline:  (1 of 1) PTHR10759//PTHR10759:SF12 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Genomic Order:  105
Name:  ? AL3G11080 Secondary Identifier:  ? PAC:35941094
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G11080 0.5kb upstream 0.5kb upstream 3435   true scaffold_3: 365391-368825 Arabidopsis lyrata
AL3G11080 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 368326-368825 Arabidopsis lyrata
AL3G11080 0.5kb downstream 0.5kb downstream 3435   true scaffold_3: 364891-368325 Arabidopsis lyrata
AL3G11080 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 364891-365390 Arabidopsis lyrata
AL3G11080 1.0kb upstream 1.0kb upstream 3935   true scaffold_3: 365391-369325 Arabidopsis lyrata
AL3G11080 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 368326-369325 Arabidopsis lyrata
AL3G11080 1.0kb downstream 1.0kb downstream 3935   true scaffold_3: 364391-368325 Arabidopsis lyrata
AL3G11080 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 364391-365390 Arabidopsis lyrata
AL3G11080 2.0kb upstream 2.0kb upstream 4935   true scaffold_3: 365391-370325 Arabidopsis lyrata
AL3G11080 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 368326-370325 Arabidopsis lyrata
AL3G11080 2.0kb downstream 2.0kb downstream 4935   true scaffold_3: 363391-368325 Arabidopsis lyrata
AL3G11080 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 363391-365390 Arabidopsis lyrata
AL3G11080 5.0kb upstream 5.0kb upstream 7935   true scaffold_3: 365391-373325 Arabidopsis lyrata
AL3G11080 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 368326-373325 Arabidopsis lyrata
AL3G11080 5.0kb downstream 5.0kb downstream 7935   true scaffold_3: 360391-368325 Arabidopsis lyrata
AL3G11080 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 360391-365390 Arabidopsis lyrata
AL3G11080 10.0kb upstream 10.0kb upstream 12935   true scaffold_3: 365391-378325 Arabidopsis lyrata
AL3G11080 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 368326-378325 Arabidopsis lyrata
AL3G11080 10.0kb downstream 10.0kb downstream 12935   true scaffold_3: 355391-368325 Arabidopsis lyrata
AL3G11080 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 355391-365390 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373949 5261 Brassicaceae View MSA
123830329 5264 Brassicales-Malvales View MSA
124321663 5266 SBM View MSA
124250472 5268 Malvidae View MSA
124063028 5270 Rosid View MSA
123747656 5271 Pentapetalae View MSA
122792050 5272 Eudicot View MSA
122050255 5273 Angiosperm View MSA
121311827 5274 Embryophyte View MSA
123349068 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain