Gene : AL3G11590 A. lyrata v2.1
Defline:  (1 of 3) PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  153
Name:  ? AL3G11590 Secondary Identifier:  ? PAC:35940555
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G11590 0.5kb upstream 0.5kb upstream 3220   true scaffold_3: 559791-563010 Arabidopsis lyrata
AL3G11590 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 562511-563010 Arabidopsis lyrata
AL3G11590 0.5kb downstream 0.5kb downstream 3220   true scaffold_3: 559291-562510 Arabidopsis lyrata
AL3G11590 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 559291-559790 Arabidopsis lyrata
AL3G11590 1.0kb upstream 1.0kb upstream 3720   true scaffold_3: 559791-563510 Arabidopsis lyrata
AL3G11590 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 562511-563510 Arabidopsis lyrata
AL3G11590 1.0kb downstream 1.0kb downstream 3720   true scaffold_3: 558791-562510 Arabidopsis lyrata
AL3G11590 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 558791-559790 Arabidopsis lyrata
AL3G11590 2.0kb upstream 2.0kb upstream 4720   true scaffold_3: 559791-564510 Arabidopsis lyrata
AL3G11590 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 562511-564510 Arabidopsis lyrata
AL3G11590 2.0kb downstream 2.0kb downstream 4720   true scaffold_3: 557791-562510 Arabidopsis lyrata
AL3G11590 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 557791-559790 Arabidopsis lyrata
AL3G11590 5.0kb upstream 5.0kb upstream 7720   true scaffold_3: 559791-567510 Arabidopsis lyrata
AL3G11590 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 562511-567510 Arabidopsis lyrata
AL3G11590 5.0kb downstream 5.0kb downstream 7720   true scaffold_3: 554791-562510 Arabidopsis lyrata
AL3G11590 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 554791-559790 Arabidopsis lyrata
AL3G11590 10.0kb upstream 10.0kb upstream 12720   true scaffold_3: 559791-572510 Arabidopsis lyrata
AL3G11590 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 562511-572510 Arabidopsis lyrata
AL3G11590 10.0kb downstream 10.0kb downstream 12720   true scaffold_3: 549791-562510 Arabidopsis lyrata
AL3G11590 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 549791-559790 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376893 5261 Brassicaceae View MSA
123801386 5264 Brassicales-Malvales View MSA
124298696 5266 SBM View MSA
124249352 5268 Malvidae View MSA
124072265 5270 Rosid View MSA
123750627 5271 Pentapetalae View MSA
122793492 5272 Eudicot View MSA
122049609 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain