Gene : AL3G11580 A. lyrata v2.1
Defline:  (1 of 1) PTHR22870:SF170 - REGULATOR OF CHROMOSOME CONDENSATION FAMILY PROTEIN Genomic Order:  152
Name:  ? AL3G11580 Secondary Identifier:  ? PAC:35941661
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G11580 0.5kb upstream 0.5kb upstream 3491   true scaffold_3: 556245-559735 Arabidopsis lyrata
AL3G11580 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 556245-556744 Arabidopsis lyrata
AL3G11580 0.5kb downstream 0.5kb downstream 3491   true scaffold_3: 556745-560235 Arabidopsis lyrata
AL3G11580 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 559736-560235 Arabidopsis lyrata
AL3G11580 1.0kb upstream 1.0kb upstream 3991   true scaffold_3: 555745-559735 Arabidopsis lyrata
AL3G11580 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 555745-556744 Arabidopsis lyrata
AL3G11580 1.0kb downstream 1.0kb downstream 3991   true scaffold_3: 556745-560735 Arabidopsis lyrata
AL3G11580 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 559736-560735 Arabidopsis lyrata
AL3G11580 2.0kb upstream 2.0kb upstream 4991   true scaffold_3: 554745-559735 Arabidopsis lyrata
AL3G11580 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 554745-556744 Arabidopsis lyrata
AL3G11580 2.0kb downstream 2.0kb downstream 4991   true scaffold_3: 556745-561735 Arabidopsis lyrata
AL3G11580 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 559736-561735 Arabidopsis lyrata
AL3G11580 5.0kb upstream 5.0kb upstream 7991   true scaffold_3: 551745-559735 Arabidopsis lyrata
AL3G11580 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 551745-556744 Arabidopsis lyrata
AL3G11580 5.0kb downstream 5.0kb downstream 7991   true scaffold_3: 556745-564735 Arabidopsis lyrata
AL3G11580 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 559736-564735 Arabidopsis lyrata
AL3G11580 10.0kb upstream 10.0kb upstream 12991   true scaffold_3: 546745-559735 Arabidopsis lyrata
AL3G11580 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 546745-556744 Arabidopsis lyrata
AL3G11580 10.0kb downstream 10.0kb downstream 12991   true scaffold_3: 556745-569735 Arabidopsis lyrata
AL3G11580 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 559736-569735 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369983 5261 Brassicaceae View MSA
123829501 5264 Brassicales-Malvales View MSA
124344724 5266 SBM View MSA
124239657 5268 Malvidae View MSA
124066260 5270 Rosid View MSA
123748631 5271 Pentapetalae View MSA
122791533 5272 Eudicot View MSA
122046241 5273 Angiosperm View MSA
121310578 5274 Embryophyte View MSA
123348026 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain