Gene : AL3G10220 A. lyrata v2.1

Defline:  (1 of 1) 1.8.3.1 - Sulfite oxidase Genomic Order:  21
Name:  ? AL3G10220 Secondary Identifier:  ? PAC:35943928

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5326 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G10220 0.5kb upstream 0.5kb upstream 3139   true scaffold_3: 74236-77374 Arabidopsis lyrata
AL3G10220 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 74236-74735 Arabidopsis lyrata
AL3G10220 0.5kb downstream 0.5kb downstream 3139   true scaffold_3: 74736-77874 Arabidopsis lyrata
AL3G10220 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 77375-77874 Arabidopsis lyrata
AL3G10220 1.0kb upstream 1.0kb upstream 3639   true scaffold_3: 73736-77374 Arabidopsis lyrata
AL3G10220 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 73736-74735 Arabidopsis lyrata
AL3G10220 1.0kb downstream 1.0kb downstream 3639   true scaffold_3: 74736-78374 Arabidopsis lyrata
AL3G10220 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 77375-78374 Arabidopsis lyrata
AL3G10220 2.0kb upstream 2.0kb upstream 4639   true scaffold_3: 72736-77374 Arabidopsis lyrata
AL3G10220 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 72736-74735 Arabidopsis lyrata
AL3G10220 2.0kb downstream 2.0kb downstream 4639   true scaffold_3: 74736-79374 Arabidopsis lyrata
AL3G10220 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 77375-79374 Arabidopsis lyrata
AL3G10220 5.0kb upstream 5.0kb upstream 7639   true scaffold_3: 69736-77374 Arabidopsis lyrata
AL3G10220 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 69736-74735 Arabidopsis lyrata
AL3G10220 5.0kb downstream 5.0kb downstream 7639   true scaffold_3: 74736-82374 Arabidopsis lyrata
AL3G10220 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 77375-82374 Arabidopsis lyrata
AL3G10220 10.0kb upstream 10.0kb upstream 12639   true scaffold_3: 64736-77374 Arabidopsis lyrata
AL3G10220 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 64736-74735 Arabidopsis lyrata
AL3G10220 10.0kb downstream 10.0kb downstream 12639   true scaffold_3: 74736-87374 Arabidopsis lyrata
AL3G10220 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 77375-87374 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379710 5261 Brassicaceae View MSA
123831313 5264 Brassicales-Malvales View MSA
124345054 5266 SBM View MSA
124243440 5268 Malvidae View MSA
124063548 5270 Rosid View MSA
123749301 5271 Pentapetalae View MSA
122793772 5272 Eudicot View MSA
122044053 5273 Angiosperm View MSA
121351692 5274 Embryophyte View MSA
123426771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain