Gene : AL3G14190 A. lyrata v2.1

Defline:  (1 of 1) K09667 - protein O-GlcNAc transferase (OGT) Genomic Order:  405
Name:  ? AL3G14190 Secondary Identifier:  ? PAC:35944166

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7437 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G14190 0.5kb upstream 0.5kb upstream 7445   true scaffold_3: 1416428-1423872 Arabidopsis lyrata
AL3G14190 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 1423373-1423872 Arabidopsis lyrata
AL3G14190 0.5kb downstream 0.5kb downstream 7445   true scaffold_3: 1415928-1423372 Arabidopsis lyrata
AL3G14190 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 1415928-1416427 Arabidopsis lyrata
AL3G14190 1.0kb upstream 1.0kb upstream 7945   true scaffold_3: 1416428-1424372 Arabidopsis lyrata
AL3G14190 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 1423373-1424372 Arabidopsis lyrata
AL3G14190 1.0kb downstream 1.0kb downstream 7945   true scaffold_3: 1415428-1423372 Arabidopsis lyrata
AL3G14190 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 1415428-1416427 Arabidopsis lyrata
AL3G14190 2.0kb upstream 2.0kb upstream 8945   true scaffold_3: 1416428-1425372 Arabidopsis lyrata
AL3G14190 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 1423373-1425372 Arabidopsis lyrata
AL3G14190 2.0kb downstream 2.0kb downstream 8945   true scaffold_3: 1414428-1423372 Arabidopsis lyrata
AL3G14190 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 1414428-1416427 Arabidopsis lyrata
AL3G14190 5.0kb upstream 5.0kb upstream 11945   true scaffold_3: 1416428-1428372 Arabidopsis lyrata
AL3G14190 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 1423373-1428372 Arabidopsis lyrata
AL3G14190 5.0kb downstream 5.0kb downstream 11945   true scaffold_3: 1411428-1423372 Arabidopsis lyrata
AL3G14190 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 1411428-1416427 Arabidopsis lyrata
AL3G14190 10.0kb upstream 10.0kb upstream 16945   true scaffold_3: 1416428-1433372 Arabidopsis lyrata
AL3G14190 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 1423373-1433372 Arabidopsis lyrata
AL3G14190 10.0kb downstream 10.0kb downstream 16945   true scaffold_3: 1406428-1423372 Arabidopsis lyrata
AL3G14190 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 1406428-1416427 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374740 5261 Brassicaceae View MSA
123828173 5264 Brassicales-Malvales View MSA
124345029 5266 SBM View MSA
124244353 5268 Malvidae View MSA
124065176 5270 Rosid View MSA
123737161 5271 Pentapetalae View MSA
122791107 5272 Eudicot View MSA
122047286 5273 Angiosperm View MSA
121344424 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain