Gene : AL3G13800 A. lyrata v2.1

Defline:  (1 of 3) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase Genomic Order:  367
Name:  ? AL3G13800 Secondary Identifier:  ? PAC:35940556

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ARGININE-SYN4-PWY Arabidopsis lyrata pathologic  
Alyrata GLUDEG-I-PWY Arabidopsis lyrata pathologic  
Alyrata GLUTAMATE-DEG1-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G13800 0.5kb upstream 0.5kb upstream 2620   true scaffold_3: 1282663-1285282 Arabidopsis lyrata
AL3G13800 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 1282663-1283162 Arabidopsis lyrata
AL3G13800 0.5kb downstream 0.5kb downstream 2620   true scaffold_3: 1283163-1285782 Arabidopsis lyrata
AL3G13800 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 1285283-1285782 Arabidopsis lyrata
AL3G13800 1.0kb upstream 1.0kb upstream 3120   true scaffold_3: 1282163-1285282 Arabidopsis lyrata
AL3G13800 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 1282163-1283162 Arabidopsis lyrata
AL3G13800 1.0kb downstream 1.0kb downstream 3120   true scaffold_3: 1283163-1286282 Arabidopsis lyrata
AL3G13800 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 1285283-1286282 Arabidopsis lyrata
AL3G13800 2.0kb upstream 2.0kb upstream 4120   true scaffold_3: 1281163-1285282 Arabidopsis lyrata
AL3G13800 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 1281163-1283162 Arabidopsis lyrata
AL3G13800 2.0kb downstream 2.0kb downstream 4120   true scaffold_3: 1283163-1287282 Arabidopsis lyrata
AL3G13800 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 1285283-1287282 Arabidopsis lyrata
AL3G13800 5.0kb upstream 5.0kb upstream 7120   true scaffold_3: 1278163-1285282 Arabidopsis lyrata
AL3G13800 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 1278163-1283162 Arabidopsis lyrata
AL3G13800 5.0kb downstream 5.0kb downstream 7120   true scaffold_3: 1283163-1290282 Arabidopsis lyrata
AL3G13800 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 1285283-1290282 Arabidopsis lyrata
AL3G13800 10.0kb upstream 10.0kb upstream 12120   true scaffold_3: 1273163-1285282 Arabidopsis lyrata
AL3G13800 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 1273163-1283162 Arabidopsis lyrata
AL3G13800 10.0kb downstream 10.0kb downstream 12120   true scaffold_3: 1283163-1295282 Arabidopsis lyrata
AL3G13800 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 1285283-1295282 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372425 5261 Brassicaceae View MSA
123840705 5264 Brassicales-Malvales View MSA
124341607 5266 SBM View MSA
124244105 5268 Malvidae View MSA
124067187 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain