Gene : AL3G13110 A. lyrata v2.1

Defline:  (1 of 1) PTHR23315:SF65 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  299
Name:  ? AL3G13110 Secondary Identifier:  ? PAC:35940209

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G13110 0.5kb upstream 0.5kb upstream 3695   true scaffold_3: 1054245-1057939 Arabidopsis lyrata
AL3G13110 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 1054245-1054744 Arabidopsis lyrata
AL3G13110 0.5kb downstream 0.5kb downstream 3695   true scaffold_3: 1054745-1058439 Arabidopsis lyrata
AL3G13110 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 1057940-1058439 Arabidopsis lyrata
AL3G13110 1.0kb upstream 1.0kb upstream 4195   true scaffold_3: 1053745-1057939 Arabidopsis lyrata
AL3G13110 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 1053745-1054744 Arabidopsis lyrata
AL3G13110 1.0kb downstream 1.0kb downstream 4195   true scaffold_3: 1054745-1058939 Arabidopsis lyrata
AL3G13110 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 1057940-1058939 Arabidopsis lyrata
AL3G13110 2.0kb upstream 2.0kb upstream 5195   true scaffold_3: 1052745-1057939 Arabidopsis lyrata
AL3G13110 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 1052745-1054744 Arabidopsis lyrata
AL3G13110 2.0kb downstream 2.0kb downstream 5195   true scaffold_3: 1054745-1059939 Arabidopsis lyrata
AL3G13110 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 1057940-1059939 Arabidopsis lyrata
AL3G13110 5.0kb upstream 5.0kb upstream 8195   true scaffold_3: 1049745-1057939 Arabidopsis lyrata
AL3G13110 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 1049745-1054744 Arabidopsis lyrata
AL3G13110 5.0kb downstream 5.0kb downstream 8195   true scaffold_3: 1054745-1062939 Arabidopsis lyrata
AL3G13110 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 1057940-1062939 Arabidopsis lyrata
AL3G13110 10.0kb upstream 10.0kb upstream 13195   true scaffold_3: 1044745-1057939 Arabidopsis lyrata
AL3G13110 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 1044745-1054744 Arabidopsis lyrata
AL3G13110 10.0kb downstream 10.0kb downstream 13195   true scaffold_3: 1054745-1067939 Arabidopsis lyrata
AL3G13110 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 1057940-1067939 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381591 5261 Brassicaceae View MSA
123841075 5264 Brassicales-Malvales View MSA
124339513 5266 SBM View MSA
124250559 5268 Malvidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain