Gene : AL3G13230 A. lyrata v2.1

Defline:  (1 of 3) PTHR31956:SF1 - NON-SPECIFIC PHOSPHOLIPASE C3-RELATED Genomic Order:  311
Name:  ? AL3G13230 Secondary Identifier:  ? PAC:35943384

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G13230 0.5kb upstream 0.5kb upstream 3193   true scaffold_3: 1082568-1085760 Arabidopsis lyrata
AL3G13230 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 1085261-1085760 Arabidopsis lyrata
AL3G13230 0.5kb downstream 0.5kb downstream 3193   true scaffold_3: 1082068-1085260 Arabidopsis lyrata
AL3G13230 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 1082068-1082567 Arabidopsis lyrata
AL3G13230 1.0kb upstream 1.0kb upstream 3693   true scaffold_3: 1082568-1086260 Arabidopsis lyrata
AL3G13230 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 1085261-1086260 Arabidopsis lyrata
AL3G13230 1.0kb downstream 1.0kb downstream 3693   true scaffold_3: 1081568-1085260 Arabidopsis lyrata
AL3G13230 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 1081568-1082567 Arabidopsis lyrata
AL3G13230 2.0kb upstream 2.0kb upstream 4693   true scaffold_3: 1082568-1087260 Arabidopsis lyrata
AL3G13230 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 1085261-1087260 Arabidopsis lyrata
AL3G13230 2.0kb downstream 2.0kb downstream 4693   true scaffold_3: 1080568-1085260 Arabidopsis lyrata
AL3G13230 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 1080568-1082567 Arabidopsis lyrata
AL3G13230 5.0kb upstream 5.0kb upstream 7693   true scaffold_3: 1082568-1090260 Arabidopsis lyrata
AL3G13230 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 1085261-1090260 Arabidopsis lyrata
AL3G13230 5.0kb downstream 5.0kb downstream 7693   true scaffold_3: 1077568-1085260 Arabidopsis lyrata
AL3G13230 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 1077568-1082567 Arabidopsis lyrata
AL3G13230 10.0kb upstream 10.0kb upstream 12693   true scaffold_3: 1082568-1095260 Arabidopsis lyrata
AL3G13230 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 1085261-1095260 Arabidopsis lyrata
AL3G13230 10.0kb downstream 10.0kb downstream 12693   true scaffold_3: 1072568-1085260 Arabidopsis lyrata
AL3G13230 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 1072568-1082567 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364132 5261 Brassicaceae View MSA
123828507 5264 Brassicales-Malvales View MSA
124340349 5266 SBM View MSA
124244843 5268 Malvidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain