Gene : AL3G12410 A. lyrata v2.1

Defline:  (1 of 2) K13176 - THO complex subunit 7 (THOC7) Genomic Order:  230
Name:  ? AL3G12410 Secondary Identifier:  ? PAC:35941180

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G12410 0.5kb upstream 0.5kb upstream 2048   true scaffold_3: 822645-824692 Arabidopsis lyrata
AL3G12410 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 824193-824692 Arabidopsis lyrata
AL3G12410 0.5kb downstream 0.5kb downstream 2048   true scaffold_3: 822145-824192 Arabidopsis lyrata
AL3G12410 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 822145-822644 Arabidopsis lyrata
AL3G12410 1.0kb upstream 1.0kb upstream 2548   true scaffold_3: 822645-825192 Arabidopsis lyrata
AL3G12410 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 824193-825192 Arabidopsis lyrata
AL3G12410 1.0kb downstream 1.0kb downstream 2548   true scaffold_3: 821645-824192 Arabidopsis lyrata
AL3G12410 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 821645-822644 Arabidopsis lyrata
AL3G12410 2.0kb upstream 2.0kb upstream 3548   true scaffold_3: 822645-826192 Arabidopsis lyrata
AL3G12410 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 824193-826192 Arabidopsis lyrata
AL3G12410 2.0kb downstream 2.0kb downstream 3548   true scaffold_3: 820645-824192 Arabidopsis lyrata
AL3G12410 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 820645-822644 Arabidopsis lyrata
AL3G12410 5.0kb upstream 5.0kb upstream 6548   true scaffold_3: 822645-829192 Arabidopsis lyrata
AL3G12410 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 824193-829192 Arabidopsis lyrata
AL3G12410 5.0kb downstream 5.0kb downstream 6548   true scaffold_3: 817645-824192 Arabidopsis lyrata
AL3G12410 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 817645-822644 Arabidopsis lyrata
AL3G12410 10.0kb upstream 10.0kb upstream 11548   true scaffold_3: 822645-834192 Arabidopsis lyrata
AL3G12410 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 824193-834192 Arabidopsis lyrata
AL3G12410 10.0kb downstream 10.0kb downstream 11548   true scaffold_3: 812645-824192 Arabidopsis lyrata
AL3G12410 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 812645-822644 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363423 5261 Brassicaceae View MSA
123836993 5264 Brassicales-Malvales View MSA
124341094 5266 SBM View MSA
124241960 5268 Malvidae View MSA
124069110 5270 Rosid View MSA
123737920 5271 Pentapetalae View MSA
122791766 5272 Eudicot View MSA
122047726 5273 Angiosperm View MSA
121351339 5274 Embryophyte View MSA
123428544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain