Gene : AL3G12870 A. lyrata v2.1
Defline:  (1 of 46) PF00582 - Universal stress protein family (Usp) Genomic Order:  274
Name:  ? AL3G12870 Secondary Identifier:  ? PAC:35943780
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G12870 0.5kb upstream 0.5kb upstream 1736   true scaffold_3: 984082-985817 Arabidopsis lyrata
AL3G12870 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 985318-985817 Arabidopsis lyrata
AL3G12870 0.5kb downstream 0.5kb downstream 1736   true scaffold_3: 983582-985317 Arabidopsis lyrata
AL3G12870 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 983582-984081 Arabidopsis lyrata
AL3G12870 1.0kb upstream 1.0kb upstream 2236   true scaffold_3: 984082-986317 Arabidopsis lyrata
AL3G12870 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 985318-986317 Arabidopsis lyrata
AL3G12870 1.0kb downstream 1.0kb downstream 2236   true scaffold_3: 983082-985317 Arabidopsis lyrata
AL3G12870 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 983082-984081 Arabidopsis lyrata
AL3G12870 2.0kb upstream 2.0kb upstream 3236   true scaffold_3: 984082-987317 Arabidopsis lyrata
AL3G12870 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 985318-987317 Arabidopsis lyrata
AL3G12870 2.0kb downstream 2.0kb downstream 3236   true scaffold_3: 982082-985317 Arabidopsis lyrata
AL3G12870 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 982082-984081 Arabidopsis lyrata
AL3G12870 5.0kb upstream 5.0kb upstream 6236   true scaffold_3: 984082-990317 Arabidopsis lyrata
AL3G12870 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 985318-990317 Arabidopsis lyrata
AL3G12870 5.0kb downstream 5.0kb downstream 6236   true scaffold_3: 979082-985317 Arabidopsis lyrata
AL3G12870 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 979082-984081 Arabidopsis lyrata
AL3G12870 10.0kb upstream 10.0kb upstream 11236   true scaffold_3: 984082-995317 Arabidopsis lyrata
AL3G12870 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 985318-995317 Arabidopsis lyrata
AL3G12870 10.0kb downstream 10.0kb downstream 11236   true scaffold_3: 974082-985317 Arabidopsis lyrata
AL3G12870 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 974082-984081 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366832 5261 Brassicaceae View MSA
123799253 5264 Brassicales-Malvales View MSA
124343931 5266 SBM View MSA
124248014 5268 Malvidae View MSA
124066369 5270 Rosid View MSA
123742988 5271 Pentapetalae View MSA
122795683 5272 Eudicot View MSA
122048128 5273 Angiosperm View MSA
121348607 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain