Gene : AL3G16170 A. lyrata v2.1
Defline:  (1 of 3) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Genomic Order:  587
Name:  ? AL3G16170 Secondary Identifier:  ? PAC:35940278
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G16170 0.5kb upstream 0.5kb upstream 1686   true scaffold_3: 2102411-2104096 Arabidopsis lyrata
AL3G16170 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2102411-2102910 Arabidopsis lyrata
AL3G16170 0.5kb downstream 0.5kb downstream 1686   true scaffold_3: 2102911-2104596 Arabidopsis lyrata
AL3G16170 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2104097-2104596 Arabidopsis lyrata
AL3G16170 1.0kb upstream 1.0kb upstream 2186   true scaffold_3: 2101911-2104096 Arabidopsis lyrata
AL3G16170 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2101911-2102910 Arabidopsis lyrata
AL3G16170 1.0kb downstream 1.0kb downstream 2186   true scaffold_3: 2102911-2105096 Arabidopsis lyrata
AL3G16170 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2104097-2105096 Arabidopsis lyrata
AL3G16170 2.0kb upstream 2.0kb upstream 3186   true scaffold_3: 2100911-2104096 Arabidopsis lyrata
AL3G16170 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2100911-2102910 Arabidopsis lyrata
AL3G16170 2.0kb downstream 2.0kb downstream 3186   true scaffold_3: 2102911-2106096 Arabidopsis lyrata
AL3G16170 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2104097-2106096 Arabidopsis lyrata
AL3G16170 5.0kb upstream 5.0kb upstream 6186   true scaffold_3: 2097911-2104096 Arabidopsis lyrata
AL3G16170 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2097911-2102910 Arabidopsis lyrata
AL3G16170 5.0kb downstream 5.0kb downstream 6186   true scaffold_3: 2102911-2109096 Arabidopsis lyrata
AL3G16170 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2104097-2109096 Arabidopsis lyrata
AL3G16170 10.0kb upstream 10.0kb upstream 11186   true scaffold_3: 2092911-2104096 Arabidopsis lyrata
AL3G16170 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2092911-2102910 Arabidopsis lyrata
AL3G16170 10.0kb downstream 10.0kb downstream 11186   true scaffold_3: 2102911-2114096 Arabidopsis lyrata
AL3G16170 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2104097-2114096 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379648 5261 Brassicaceae View MSA
123833742 5264 Brassicales-Malvales View MSA
124343134 5266 SBM View MSA
124253339 5268 Malvidae View MSA
124071085 5270 Rosid View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain