Gene : AL3G16290 A. lyrata v2.1

Defline:  (1 of 2) PTHR13832:SF198 - PROTEIN PHOSPHATASE 2C 34-RELATED Genomic Order:  599
Name:  ? AL3G16290 Secondary Identifier:  ? PAC:35940375

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G16290 0.5kb upstream 0.5kb upstream 3289   true scaffold_3: 2135458-2138746 Arabidopsis lyrata
AL3G16290 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2138247-2138746 Arabidopsis lyrata
AL3G16290 0.5kb downstream 0.5kb downstream 3289   true scaffold_3: 2134958-2138246 Arabidopsis lyrata
AL3G16290 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2134958-2135457 Arabidopsis lyrata
AL3G16290 1.0kb upstream 1.0kb upstream 3789   true scaffold_3: 2135458-2139246 Arabidopsis lyrata
AL3G16290 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2138247-2139246 Arabidopsis lyrata
AL3G16290 1.0kb downstream 1.0kb downstream 3789   true scaffold_3: 2134458-2138246 Arabidopsis lyrata
AL3G16290 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2134458-2135457 Arabidopsis lyrata
AL3G16290 2.0kb upstream 2.0kb upstream 4789   true scaffold_3: 2135458-2140246 Arabidopsis lyrata
AL3G16290 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2138247-2140246 Arabidopsis lyrata
AL3G16290 2.0kb downstream 2.0kb downstream 4789   true scaffold_3: 2133458-2138246 Arabidopsis lyrata
AL3G16290 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2133458-2135457 Arabidopsis lyrata
AL3G16290 5.0kb upstream 5.0kb upstream 7789   true scaffold_3: 2135458-2143246 Arabidopsis lyrata
AL3G16290 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2138247-2143246 Arabidopsis lyrata
AL3G16290 5.0kb downstream 5.0kb downstream 7789   true scaffold_3: 2130458-2138246 Arabidopsis lyrata
AL3G16290 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2130458-2135457 Arabidopsis lyrata
AL3G16290 10.0kb upstream 10.0kb upstream 12789   true scaffold_3: 2135458-2148246 Arabidopsis lyrata
AL3G16290 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2138247-2148246 Arabidopsis lyrata
AL3G16290 10.0kb downstream 10.0kb downstream 12789   true scaffold_3: 2125458-2138246 Arabidopsis lyrata
AL3G16290 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2125458-2135457 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365204 5261 Brassicaceae View MSA
123837372 5264 Brassicales-Malvales View MSA
124346302 5266 SBM View MSA
124240146 5268 Malvidae View MSA
124065927 5270 Rosid View MSA
123753048 5271 Pentapetalae View MSA
122797893 5272 Eudicot View MSA
122041990 5273 Angiosperm View MSA
121309911 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain