Gene : AL3G16100 A. lyrata v2.1
Defline:  (1 of 3) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  581
Name:  ? AL3G16100 Secondary Identifier:  ? PAC:35943509
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G16100 0.5kb upstream 0.5kb upstream 2158   true scaffold_3: 2082231-2084388 Arabidopsis lyrata
AL3G16100 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2082231-2082730 Arabidopsis lyrata
AL3G16100 0.5kb downstream 0.5kb downstream 2158   true scaffold_3: 2082731-2084888 Arabidopsis lyrata
AL3G16100 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2084389-2084888 Arabidopsis lyrata
AL3G16100 1.0kb upstream 1.0kb upstream 2658   true scaffold_3: 2081731-2084388 Arabidopsis lyrata
AL3G16100 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2081731-2082730 Arabidopsis lyrata
AL3G16100 1.0kb downstream 1.0kb downstream 2658   true scaffold_3: 2082731-2085388 Arabidopsis lyrata
AL3G16100 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2084389-2085388 Arabidopsis lyrata
AL3G16100 2.0kb upstream 2.0kb upstream 3658   true scaffold_3: 2080731-2084388 Arabidopsis lyrata
AL3G16100 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2080731-2082730 Arabidopsis lyrata
AL3G16100 2.0kb downstream 2.0kb downstream 3658   true scaffold_3: 2082731-2086388 Arabidopsis lyrata
AL3G16100 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2084389-2086388 Arabidopsis lyrata
AL3G16100 5.0kb upstream 5.0kb upstream 6658   true scaffold_3: 2077731-2084388 Arabidopsis lyrata
AL3G16100 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2077731-2082730 Arabidopsis lyrata
AL3G16100 5.0kb downstream 5.0kb downstream 6658   true scaffold_3: 2082731-2089388 Arabidopsis lyrata
AL3G16100 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2084389-2089388 Arabidopsis lyrata
AL3G16100 10.0kb upstream 10.0kb upstream 11658   true scaffold_3: 2072731-2084388 Arabidopsis lyrata
AL3G16100 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2072731-2082730 Arabidopsis lyrata
AL3G16100 10.0kb downstream 10.0kb downstream 11658   true scaffold_3: 2082731-2094388 Arabidopsis lyrata
AL3G16100 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2084389-2094388 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366671 5261 Brassicaceae View MSA
123832312 5264 Brassicales-Malvales View MSA
124341369 5266 SBM View MSA
124251782 5268 Malvidae View MSA
124071747 5270 Rosid View MSA
123747287 5271 Pentapetalae View MSA
122790209 5272 Eudicot View MSA
122043264 5273 Angiosperm View MSA
121343982 5274 Embryophyte View MSA
123379951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain