Gene : AL3G15040 A. lyrata v2.1

Defline:  (1 of 11) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  481
Name:  ? AL3G15040 Secondary Identifier:  ? PAC:35941917

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G15040 0.5kb upstream 0.5kb upstream 1950   true scaffold_3: 1695992-1697941 Arabidopsis lyrata
AL3G15040 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 1697442-1697941 Arabidopsis lyrata
AL3G15040 0.5kb downstream 0.5kb downstream 1950   true scaffold_3: 1695492-1697441 Arabidopsis lyrata
AL3G15040 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 1695492-1695991 Arabidopsis lyrata
AL3G15040 1.0kb upstream 1.0kb upstream 2450   true scaffold_3: 1695992-1698441 Arabidopsis lyrata
AL3G15040 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 1697442-1698441 Arabidopsis lyrata
AL3G15040 1.0kb downstream 1.0kb downstream 2450   true scaffold_3: 1694992-1697441 Arabidopsis lyrata
AL3G15040 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 1694992-1695991 Arabidopsis lyrata
AL3G15040 2.0kb upstream 2.0kb upstream 3450   true scaffold_3: 1695992-1699441 Arabidopsis lyrata
AL3G15040 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 1697442-1699441 Arabidopsis lyrata
AL3G15040 2.0kb downstream 2.0kb downstream 3450   true scaffold_3: 1693992-1697441 Arabidopsis lyrata
AL3G15040 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 1693992-1695991 Arabidopsis lyrata
AL3G15040 5.0kb upstream 5.0kb upstream 6450   true scaffold_3: 1695992-1702441 Arabidopsis lyrata
AL3G15040 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 1697442-1702441 Arabidopsis lyrata
AL3G15040 5.0kb downstream 5.0kb downstream 6450   true scaffold_3: 1690992-1697441 Arabidopsis lyrata
AL3G15040 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 1690992-1695991 Arabidopsis lyrata
AL3G15040 10.0kb upstream 10.0kb upstream 11450   true scaffold_3: 1695992-1707441 Arabidopsis lyrata
AL3G15040 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 1697442-1707441 Arabidopsis lyrata
AL3G15040 10.0kb downstream 10.0kb downstream 11450   true scaffold_3: 1685992-1697441 Arabidopsis lyrata
AL3G15040 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 1685992-1695991 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368629 5261 Brassicaceae View MSA
123838433 5264 Brassicales-Malvales View MSA
124346422 5266 SBM View MSA
124253833 5268 Malvidae View MSA
124061811 5270 Rosid View MSA
123749881 5271 Pentapetalae View MSA
122794470 5272 Eudicot View MSA
122042584 5273 Angiosperm View MSA
121347178 5274 Embryophyte View MSA
123380504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain