Gene : AL3G19400 A. lyrata v2.1

Defline:  (1 of 8) PTHR10615 - HISTONE ACETYLTRANSFERASE Genomic Order:  894
Name:  ? AL3G19400 Secondary Identifier:  ? PAC:35943442

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G19400 0.5kb upstream 0.5kb upstream 4765   true scaffold_3: 3341695-3346459 Arabidopsis lyrata
AL3G19400 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3345960-3346459 Arabidopsis lyrata
AL3G19400 0.5kb downstream 0.5kb downstream 4765   true scaffold_3: 3341195-3345959 Arabidopsis lyrata
AL3G19400 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3341195-3341694 Arabidopsis lyrata
AL3G19400 1.0kb upstream 1.0kb upstream 5265   true scaffold_3: 3341695-3346959 Arabidopsis lyrata
AL3G19400 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3345960-3346959 Arabidopsis lyrata
AL3G19400 1.0kb downstream 1.0kb downstream 5265   true scaffold_3: 3340695-3345959 Arabidopsis lyrata
AL3G19400 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3340695-3341694 Arabidopsis lyrata
AL3G19400 2.0kb upstream 2.0kb upstream 6265   true scaffold_3: 3341695-3347959 Arabidopsis lyrata
AL3G19400 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3345960-3347959 Arabidopsis lyrata
AL3G19400 2.0kb downstream 2.0kb downstream 6265   true scaffold_3: 3339695-3345959 Arabidopsis lyrata
AL3G19400 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3339695-3341694 Arabidopsis lyrata
AL3G19400 5.0kb upstream 5.0kb upstream 9265   true scaffold_3: 3341695-3350959 Arabidopsis lyrata
AL3G19400 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3345960-3350959 Arabidopsis lyrata
AL3G19400 5.0kb downstream 5.0kb downstream 9265   true scaffold_3: 3336695-3345959 Arabidopsis lyrata
AL3G19400 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3336695-3341694 Arabidopsis lyrata
AL3G19400 10.0kb upstream 10.0kb upstream 14265   true scaffold_3: 3341695-3355959 Arabidopsis lyrata
AL3G19400 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3345960-3355959 Arabidopsis lyrata
AL3G19400 10.0kb downstream 10.0kb downstream 14265   true scaffold_3: 3331695-3345959 Arabidopsis lyrata
AL3G19400 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3331695-3341694 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366606 5261 Brassicaceae View MSA
123841719 5264 Brassicales-Malvales View MSA
124340017 5266 SBM View MSA
124243791 5268 Malvidae View MSA
124064827 5270 Rosid View MSA
123748357 5271 Pentapetalae View MSA
122789361 5272 Eudicot View MSA
122043559 5273 Angiosperm View MSA
121347364 5274 Embryophyte View MSA
123380534 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain