Gene : AL3G19340 A. lyrata v2.1

Defline:  (1 of 1) PTHR23086:SF29 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 6 Genomic Order:  888
Name:  ? AL3G19340 Secondary Identifier:  ? PAC:35940511

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G19340 0.5kb upstream 0.5kb upstream 3910   true scaffold_3: 3317954-3321863 Arabidopsis lyrata
AL3G19340 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3317954-3318453 Arabidopsis lyrata
AL3G19340 0.5kb downstream 0.5kb downstream 3910   true scaffold_3: 3318454-3322363 Arabidopsis lyrata
AL3G19340 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3321864-3322363 Arabidopsis lyrata
AL3G19340 1.0kb upstream 1.0kb upstream 4410   true scaffold_3: 3317454-3321863 Arabidopsis lyrata
AL3G19340 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3317454-3318453 Arabidopsis lyrata
AL3G19340 1.0kb downstream 1.0kb downstream 4410   true scaffold_3: 3318454-3322863 Arabidopsis lyrata
AL3G19340 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3321864-3322863 Arabidopsis lyrata
AL3G19340 2.0kb upstream 2.0kb upstream 5410   true scaffold_3: 3316454-3321863 Arabidopsis lyrata
AL3G19340 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3316454-3318453 Arabidopsis lyrata
AL3G19340 2.0kb downstream 2.0kb downstream 5410   true scaffold_3: 3318454-3323863 Arabidopsis lyrata
AL3G19340 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3321864-3323863 Arabidopsis lyrata
AL3G19340 5.0kb upstream 5.0kb upstream 8410   true scaffold_3: 3313454-3321863 Arabidopsis lyrata
AL3G19340 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3313454-3318453 Arabidopsis lyrata
AL3G19340 5.0kb downstream 5.0kb downstream 8410   true scaffold_3: 3318454-3326863 Arabidopsis lyrata
AL3G19340 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3321864-3326863 Arabidopsis lyrata
AL3G19340 10.0kb upstream 10.0kb upstream 13410   true scaffold_3: 3308454-3321863 Arabidopsis lyrata
AL3G19340 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3308454-3318453 Arabidopsis lyrata
AL3G19340 10.0kb downstream 10.0kb downstream 13410   true scaffold_3: 3318454-3331863 Arabidopsis lyrata
AL3G19340 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3321864-3331863 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362710 5261 Brassicaceae View MSA
123835187 5264 Brassicales-Malvales View MSA
124337249 5266 SBM View MSA
124238892 5268 Malvidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain