Gene : AL3G18460 A. lyrata v2.1
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  803
Name:  ? AL3G18460 Secondary Identifier:  ? PAC:35942029
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G18460 0.5kb upstream 0.5kb upstream 2168   true scaffold_3: 3033303-3035470 Arabidopsis lyrata
AL3G18460 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3033303-3033802 Arabidopsis lyrata
AL3G18460 0.5kb downstream 0.5kb downstream 2168   true scaffold_3: 3033803-3035970 Arabidopsis lyrata
AL3G18460 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3035471-3035970 Arabidopsis lyrata
AL3G18460 1.0kb upstream 1.0kb upstream 2668   true scaffold_3: 3032803-3035470 Arabidopsis lyrata
AL3G18460 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3032803-3033802 Arabidopsis lyrata
AL3G18460 1.0kb downstream 1.0kb downstream 2668   true scaffold_3: 3033803-3036470 Arabidopsis lyrata
AL3G18460 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3035471-3036470 Arabidopsis lyrata
AL3G18460 2.0kb upstream 2.0kb upstream 3668   true scaffold_3: 3031803-3035470 Arabidopsis lyrata
AL3G18460 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3031803-3033802 Arabidopsis lyrata
AL3G18460 2.0kb downstream 2.0kb downstream 3668   true scaffold_3: 3033803-3037470 Arabidopsis lyrata
AL3G18460 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3035471-3037470 Arabidopsis lyrata
AL3G18460 5.0kb upstream 5.0kb upstream 6668   true scaffold_3: 3028803-3035470 Arabidopsis lyrata
AL3G18460 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3028803-3033802 Arabidopsis lyrata
AL3G18460 5.0kb downstream 5.0kb downstream 6668   true scaffold_3: 3033803-3040470 Arabidopsis lyrata
AL3G18460 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3035471-3040470 Arabidopsis lyrata
AL3G18460 10.0kb upstream 10.0kb upstream 11668   true scaffold_3: 3023803-3035470 Arabidopsis lyrata
AL3G18460 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3023803-3033802 Arabidopsis lyrata
AL3G18460 10.0kb downstream 10.0kb downstream 11668   true scaffold_3: 3033803-3045470 Arabidopsis lyrata
AL3G18460 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3035471-3045470 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360414 5261 Brassicaceae View MSA
123797948 5264 Brassicales-Malvales View MSA
124295645 5266 SBM View MSA
124148023 5268 Malvidae View MSA
123874109 5270 Rosid View MSA
123746059 5271 Pentapetalae View MSA
122771759 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain