Gene : AL3G17750 A. lyrata v2.1

Defline:  (1 of 1) PTHR11699:SF25 - ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED Genomic Order:  739
Name:  ? AL3G17750 Secondary Identifier:  ? PAC:35940179

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-2724 Arabidopsis lyrata pathologic  
Alyrata PWY-6054 Arabidopsis lyrata pathologic  
Alyrata PWY66-21 Arabidopsis lyrata pathologic  
Alyrata PWY66-389 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G17750 0.5kb upstream 0.5kb upstream 4564   true scaffold_3: 2784369-2788932 Arabidopsis lyrata
AL3G17750 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2788433-2788932 Arabidopsis lyrata
AL3G17750 0.5kb downstream 0.5kb downstream 4564   true scaffold_3: 2783869-2788432 Arabidopsis lyrata
AL3G17750 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2783869-2784368 Arabidopsis lyrata
AL3G17750 1.0kb upstream 1.0kb upstream 5064   true scaffold_3: 2784369-2789432 Arabidopsis lyrata
AL3G17750 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2788433-2789432 Arabidopsis lyrata
AL3G17750 1.0kb downstream 1.0kb downstream 5064   true scaffold_3: 2783369-2788432 Arabidopsis lyrata
AL3G17750 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2783369-2784368 Arabidopsis lyrata
AL3G17750 2.0kb upstream 2.0kb upstream 6064   true scaffold_3: 2784369-2790432 Arabidopsis lyrata
AL3G17750 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2788433-2790432 Arabidopsis lyrata
AL3G17750 2.0kb downstream 2.0kb downstream 6064   true scaffold_3: 2782369-2788432 Arabidopsis lyrata
AL3G17750 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2782369-2784368 Arabidopsis lyrata
AL3G17750 5.0kb upstream 5.0kb upstream 9064   true scaffold_3: 2784369-2793432 Arabidopsis lyrata
AL3G17750 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2788433-2793432 Arabidopsis lyrata
AL3G17750 5.0kb downstream 5.0kb downstream 9064   true scaffold_3: 2779369-2788432 Arabidopsis lyrata
AL3G17750 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2779369-2784368 Arabidopsis lyrata
AL3G17750 10.0kb upstream 10.0kb upstream 14064   true scaffold_3: 2784369-2798432 Arabidopsis lyrata
AL3G17750 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2788433-2798432 Arabidopsis lyrata
AL3G17750 10.0kb downstream 10.0kb downstream 14064   true scaffold_3: 2774369-2788432 Arabidopsis lyrata
AL3G17750 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2774369-2784368 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365590 5261 Brassicaceae View MSA
123833442 5264 Brassicales-Malvales View MSA
124345840 5266 SBM View MSA
124239129 5268 Malvidae View MSA
124060659 5270 Rosid View MSA
123739453 5271 Pentapetalae View MSA
122786006 5272 Eudicot View MSA
122043329 5273 Angiosperm View MSA
121348017 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain