Gene : AL3G17740 A. lyrata v2.1

Defline:  (1 of 2) PTHR11945:SF229 - F23H11.23 PROTEIN-RELATED Genomic Order:  738
Name:  ? AL3G17740 Secondary Identifier:  ? PAC:35942988

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G17740 0.5kb upstream 0.5kb upstream 1310   true scaffold_3: 2782773-2784082 Arabidopsis lyrata
AL3G17740 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2783583-2784082 Arabidopsis lyrata
AL3G17740 0.5kb downstream 0.5kb downstream 1310   true scaffold_3: 2782273-2783582 Arabidopsis lyrata
AL3G17740 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2782273-2782772 Arabidopsis lyrata
AL3G17740 1.0kb upstream 1.0kb upstream 1810   true scaffold_3: 2782773-2784582 Arabidopsis lyrata
AL3G17740 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2783583-2784582 Arabidopsis lyrata
AL3G17740 1.0kb downstream 1.0kb downstream 1810   true scaffold_3: 2781773-2783582 Arabidopsis lyrata
AL3G17740 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2781773-2782772 Arabidopsis lyrata
AL3G17740 2.0kb upstream 2.0kb upstream 2810   true scaffold_3: 2782773-2785582 Arabidopsis lyrata
AL3G17740 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2783583-2785582 Arabidopsis lyrata
AL3G17740 2.0kb downstream 2.0kb downstream 2810   true scaffold_3: 2780773-2783582 Arabidopsis lyrata
AL3G17740 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2780773-2782772 Arabidopsis lyrata
AL3G17740 5.0kb upstream 5.0kb upstream 5810   true scaffold_3: 2782773-2788582 Arabidopsis lyrata
AL3G17740 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2783583-2788582 Arabidopsis lyrata
AL3G17740 5.0kb downstream 5.0kb downstream 5810   true scaffold_3: 2777773-2783582 Arabidopsis lyrata
AL3G17740 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2777773-2782772 Arabidopsis lyrata
AL3G17740 10.0kb upstream 10.0kb upstream 10810   true scaffold_3: 2782773-2793582 Arabidopsis lyrata
AL3G17740 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2783583-2793582 Arabidopsis lyrata
AL3G17740 10.0kb downstream 10.0kb downstream 10810   true scaffold_3: 2772773-2783582 Arabidopsis lyrata
AL3G17740 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2772773-2782772 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363401 5261 Brassicaceae View MSA
123836412 5264 Brassicales-Malvales View MSA
124336966 5266 SBM View MSA
124242399 5268 Malvidae View MSA
124050462 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain