Gene : AL3G17620 A. lyrata v2.1

Defline:  (1 of 1) 2.7.1.6 - Galactokinase Genomic Order:  726
Name:  ? AL3G17620 Secondary Identifier:  ? PAC:35943236

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3821 Arabidopsis lyrata pathologic  
Alyrata PWY-6527 Arabidopsis lyrata pathologic  
Alyrata PWY66-422 Arabidopsis lyrata pathologic  
Alyrata PWY-7344 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G17620 0.5kb upstream 0.5kb upstream 3450   true scaffold_3: 2734363-2737812 Arabidopsis lyrata
AL3G17620 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2737313-2737812 Arabidopsis lyrata
AL3G17620 0.5kb downstream 0.5kb downstream 3450   true scaffold_3: 2733863-2737312 Arabidopsis lyrata
AL3G17620 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2733863-2734362 Arabidopsis lyrata
AL3G17620 1.0kb upstream 1.0kb upstream 3950   true scaffold_3: 2734363-2738312 Arabidopsis lyrata
AL3G17620 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2737313-2738312 Arabidopsis lyrata
AL3G17620 1.0kb downstream 1.0kb downstream 3950   true scaffold_3: 2733363-2737312 Arabidopsis lyrata
AL3G17620 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2733363-2734362 Arabidopsis lyrata
AL3G17620 2.0kb upstream 2.0kb upstream 4950   true scaffold_3: 2734363-2739312 Arabidopsis lyrata
AL3G17620 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2737313-2739312 Arabidopsis lyrata
AL3G17620 2.0kb downstream 2.0kb downstream 4950   true scaffold_3: 2732363-2737312 Arabidopsis lyrata
AL3G17620 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2732363-2734362 Arabidopsis lyrata
AL3G17620 5.0kb upstream 5.0kb upstream 7950   true scaffold_3: 2734363-2742312 Arabidopsis lyrata
AL3G17620 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2737313-2742312 Arabidopsis lyrata
AL3G17620 5.0kb downstream 5.0kb downstream 7950   true scaffold_3: 2729363-2737312 Arabidopsis lyrata
AL3G17620 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2729363-2734362 Arabidopsis lyrata
AL3G17620 10.0kb upstream 10.0kb upstream 12950   true scaffold_3: 2734363-2747312 Arabidopsis lyrata
AL3G17620 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2737313-2747312 Arabidopsis lyrata
AL3G17620 10.0kb downstream 10.0kb downstream 12950   true scaffold_3: 2724363-2737312 Arabidopsis lyrata
AL3G17620 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2724363-2734362 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364076 5261 Brassicaceae View MSA
123829397 5264 Brassicales-Malvales View MSA
124342034 5266 SBM View MSA
124248055 5268 Malvidae View MSA
124065862 5270 Rosid View MSA
123740112 5271 Pentapetalae View MSA
122791585 5272 Eudicot View MSA
122044418 5273 Angiosperm View MSA
121346867 5274 Embryophyte View MSA
123425103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain