Gene : AL3G21970 A. lyrata v2.1

Defline:  (1 of 3) 3.1.3.64 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase Genomic Order:  1137
Name:  ? AL3G21970 Secondary Identifier:  ? PAC:35942348

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6367 Arabidopsis lyrata pathologic  
Alyrata PWY-6368 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G21970 0.5kb upstream 0.5kb upstream 6152   true scaffold_3: 4229248-4235399 Arabidopsis lyrata
AL3G21970 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4234900-4235399 Arabidopsis lyrata
AL3G21970 0.5kb downstream 0.5kb downstream 6152   true scaffold_3: 4228748-4234899 Arabidopsis lyrata
AL3G21970 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4228748-4229247 Arabidopsis lyrata
AL3G21970 1.0kb upstream 1.0kb upstream 6652   true scaffold_3: 4229248-4235899 Arabidopsis lyrata
AL3G21970 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4234900-4235899 Arabidopsis lyrata
AL3G21970 1.0kb downstream 1.0kb downstream 6652   true scaffold_3: 4228248-4234899 Arabidopsis lyrata
AL3G21970 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4228248-4229247 Arabidopsis lyrata
AL3G21970 2.0kb upstream 2.0kb upstream 7652   true scaffold_3: 4229248-4236899 Arabidopsis lyrata
AL3G21970 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4234900-4236899 Arabidopsis lyrata
AL3G21970 2.0kb downstream 2.0kb downstream 7652   true scaffold_3: 4227248-4234899 Arabidopsis lyrata
AL3G21970 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4227248-4229247 Arabidopsis lyrata
AL3G21970 5.0kb upstream 5.0kb upstream 10652   true scaffold_3: 4229248-4239899 Arabidopsis lyrata
AL3G21970 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4234900-4239899 Arabidopsis lyrata
AL3G21970 5.0kb downstream 5.0kb downstream 10652   true scaffold_3: 4224248-4234899 Arabidopsis lyrata
AL3G21970 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4224248-4229247 Arabidopsis lyrata
AL3G21970 10.0kb upstream 10.0kb upstream 15652   true scaffold_3: 4229248-4244899 Arabidopsis lyrata
AL3G21970 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4234900-4244899 Arabidopsis lyrata
AL3G21970 10.0kb downstream 10.0kb downstream 15652   true scaffold_3: 4219248-4234899 Arabidopsis lyrata
AL3G21970 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4219248-4229247 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373913 5261 Brassicaceae View MSA
123833188 5264 Brassicales-Malvales View MSA
124321853 5266 SBM View MSA
124240271 5268 Malvidae View MSA
124069082 5270 Rosid View MSA
123744322 5271 Pentapetalae View MSA
122796754 5272 Eudicot View MSA
122047455 5273 Angiosperm View MSA
121350859 5274 Embryophyte View MSA
123381910 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain